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IMGVR_UViG_3300006634_000003-3300006634-Ga0079290_10001321
Arc-VirIMGVR_UViG_3300006634_000003-3300006634-Ga0079290_10001321
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-102
Domain cluster:
rep: IMGVR_UViG_3300005298_000040-3300005298-Ga0071330_107091546__D3-94
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 0.70 | 63.0 | 5.35e-01 | 100.0% | 67.3% |
| 5b2nA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 44.0 | 3.08e-01 | 92.8% | 59.7% |
| 1rifA01 | 3.30.780.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.54 | 39.0 | 3.58e-01 | 76.8% | 95.6% |
| 2ra9A01 | 3.10.540.10 | Alpha Beta › Roll › duf1285 like fold › duf1285 like domain | 0.54 | 29.0 | 3.27e-01 | 97.1% | 68.5% |
| 4a17H02 | 3.30.60.300 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.52 | 26.0 | 3.37e-01 | 76.8% | 87.2% |
| 2cw7A02 | 1.10.10.1010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV | 0.51 | 35.0 | 2.79e-01 | 71.0% | 58.2% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.22e-01 | 84.1% | 84.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077628 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.79 | 70.0 | 6.59e-01 | 100.0% | 90.6% |
| 5039151 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.79 | 71.0 | 6.23e-01 | 100.0% | 75.0% |
| 3967308 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.70 | 40.0 | 3.00e-01 | 97.1% | 23.6% |
| 3746278 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.64 | 50.0 | 2.64e-01 | 98.6% | 2.9% |
| 3846614 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.60 | 50.0 | 2.64e-01 | 98.6% | 3.7% |
| 3990029 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.60 | 40.0 | 2.93e-01 | 92.8% | 26.9% |
| 3718990 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 50.0 | 3.83e-01 | 98.6% | 39.4% |
| 4645731 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 46.0 | 2.60e-01 | 95.7% | 7.9% |
| 3819754 | 633.21.1.18 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom | 0.56 | 38.0 | 2.94e-01 | 72.5% | 93.8% |
| 3895660 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.55 | 41.0 | 4.04e-01 | 97.1% | 76.0% |
| 3609229 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.55 | 45.0 | 3.35e-01 | 95.7% | 87.2% |
| 3256882 | 103.8.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain › SBDS_domain_II | 0.54 | 37.0 | 3.75e-01 | 72.5% | 90.0% |
| 4027475 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 40.0 | 3.81e-01 | 82.6% | 65.9% |
| 3781909 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 41.0 | 3.31e-01 | 89.9% | 58.7% |
| 5046321 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.53 | 47.0 | 3.33e-01 | 100.0% | 74.0% |
| 3595118 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 40.0 | 2.66e-01 | 89.9% | 58.9% |
| 3353864 | 101.1.2.212 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cac1_C | 0.52 | 31.0 | 3.19e-01 | 98.6% | 58.6% |
| 3608630 | 103.8.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain › SBDS_domain_II | 0.52 | 36.0 | 3.69e-01 | 72.5% | 95.4% |
| 3601118 | 103.8.1.0 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain | 0.52 | 36.0 | 3.67e-01 | 72.5% | 95.4% |
| 3701382 | 312.1.1.8 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C | 0.51 | 42.0 | 2.96e-01 | 97.1% | 65.9% |
| 3193704 | 109.3.1.152 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › NACHT_N | 0.50 | 38.0 | 2.72e-01 | 88.4% | 54.4% |
| 3706757 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.50 | 42.0 | 3.14e-01 | 100.0% | 82.0% |