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IMGVR_UViG_3300006634_000003-3300006634-Ga0079290_10001354
Arc-VirIMGVR_UViG_3300006634_000003-3300006634-Ga0079290_10001354
Identity
- Kingdom:
- archaea
Quality
68.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-67
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pi2D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 68.0 | 5.49e-01 | 100.0% | 48.8% |
| 1nnxA00 | 2.40.50.200 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Bacterial OB-fold | 0.77 | 64.0 | 5.67e-01 | 95.5% | 63.4% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 69.0 | 5.84e-01 | 100.0% | 70.8% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 69.0 | 6.20e-01 | 100.0% | 83.3% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 67.0 | 6.02e-01 | 98.5% | 71.4% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 65.0 | 5.44e-01 | 100.0% | 62.9% |
| 2cwaA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 67.0 | 5.62e-01 | 100.0% | 70.6% |
| 2k5dA01 | 2.40.50.390 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Conjugative transposon protein, DUF961 | 0.74 | 64.0 | 5.48e-01 | 98.5% | 78.0% |
| 5jpnC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 62.0 | 4.73e-01 | 100.0% | 51.0% |
| 1an8A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 57.0 | 5.56e-01 | 95.5% | 81.3% |
| 4gnxC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 62.0 | 4.46e-01 | 98.5% | 69.9% |
| 4mtnA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 50.0 | 5.11e-01 | 86.4% | 82.5% |
| 4l5rC02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 58.0 | 5.34e-01 | 100.0% | 71.9% |
| 2zxrA01 | 2.40.50.460 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 56.0 | 4.22e-01 | 97.0% | 38.0% |
| 6ro0D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 58.0 | 4.94e-01 | 98.5% | 80.9% |
| 2i46A00 | 2.40.50.960 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 57.0 | 4.49e-01 | 100.0% | 61.8% |
| 3q8dA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 59.0 | 5.66e-01 | 100.0% | 85.7% |
| 2dgyA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 49.0 | 4.67e-01 | 95.5% | 68.4% |
| 1eu3A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 54.0 | 5.14e-01 | 97.0% | 83.7% |
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 47.0 | 4.70e-01 | 90.9% | 75.7% |
| 1wfqA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 51.0 | 4.94e-01 | 97.0% | 80.8% |
| 2iciA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 53.0 | 5.07e-01 | 97.0% | 82.1% |
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 48.0 | 4.81e-01 | 93.9% | 86.4% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.60 | 51.0 | 4.68e-01 | 98.5% | 80.9% |
| 2id0A02 | 2.40.50.640 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 48.0 | 4.69e-01 | 100.0% | 84.9% |
| 1b3qA04 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.56 | 38.0 | 3.92e-01 | 87.9% | 76.2% |
| 3fvyA03 | 3.30.70.2600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 4.40e-01 | 90.9% | 100.0% |
| 2b0vA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 38.0 | 3.03e-01 | 77.3% | 62.8% |
| 4kyxA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 37.0 | 2.99e-01 | 75.8% | 77.0% |
| 3tqfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 3.16e-01 | 92.4% | 82.4% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 42.0 | 3.31e-01 | 95.5% | 82.1% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4120870 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.79 | 72.0 | 5.97e-01 | 98.5% | 60.0% |
| 4071867 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.79 | 71.0 | 5.73e-01 | 100.0% | 56.0% |
| 3356732 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.78 | 68.0 | 5.47e-01 | 100.0% | 51.7% |
| 3276150 | 2.1.1.52 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 | 0.77 | 71.0 | 5.32e-01 | 100.0% | 50.0% |
| 3956143 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 65.0 | 5.91e-01 | 93.9% | 78.9% |
| 3945680 | 2.1.1.30 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BOF | 0.77 | 64.0 | 5.66e-01 | 97.0% | 63.2% |
| 4944053 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 68.0 | 6.55e-01 | 100.0% | 85.3% |
| 4600598 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 69.0 | 5.71e-01 | 100.0% | 64.3% |
| 3228963 | 2.1.1.311 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31223 | 0.76 | 68.0 | 5.93e-01 | 100.0% | 70.0% |
| 4477850 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.76 | 69.0 | 5.93e-01 | 100.0% | 74.0% |
| 4188423 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.76 | 68.0 | 5.47e-01 | 100.0% | 56.0% |
| 4240090 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.75 | 68.0 | 5.90e-01 | 100.0% | 68.0% |
| 4487905 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.75 | 65.0 | 5.55e-01 | 95.5% | 62.9% |
| 3782626 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 68.0 | 5.53e-01 | 100.0% | 59.2% |
| 5054825 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 65.0 | 5.40e-01 | 95.5% | 81.7% |
| 3679990 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 59.0 | 5.84e-01 | 97.0% | 81.4% |
| 4988607 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 68.0 | 5.38e-01 | 100.0% | 50.8% |
| 4937702 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 67.0 | 5.24e-01 | 100.0% | 48.1% |
| 3976859 | 2.1.1.30 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BOF | 0.74 | 61.0 | 6.15e-01 | 93.9% | 89.2% |
| 3216323 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.74 | 67.0 | 6.14e-01 | 100.0% | 78.8% |
| 4551354 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.74 | 55.0 | 5.26e-01 | 90.9% | 69.3% |
| 3888709 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.74 | 67.0 | 5.24e-01 | 100.0% | 48.9% |
| 3320129 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.74 | 58.0 | 5.93e-01 | 84.8% | 100.0% |
| 4600925 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 63.0 | 5.61e-01 | 95.5% | 69.5% |
| 5081146 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 65.0 | 5.80e-01 | 98.5% | 70.8% |
| 3726706 | 2.1.1.43 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 | 0.73 | 64.0 | 5.21e-01 | 100.0% | 52.5% |
| 5059843 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 64.0 | 5.44e-01 | 95.5% | 63.8% |
| 4951486 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.73 | 64.0 | 5.42e-01 | 98.5% | 65.5% |
| 3619157 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.73 | 65.0 | 5.60e-01 | 100.0% | 63.8% |
| 4348646 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.73 | 64.0 | 5.51e-01 | 98.5% | 64.8% |
| 4309540 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.73 | 65.0 | 5.53e-01 | 98.5% | 64.8% |
| 4033869 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.73 | 65.0 | 5.56e-01 | 100.0% | 65.7% |
| 4970159 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 63.0 | 5.62e-01 | 97.0% | 72.6% |
| 3386993 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.73 | 55.0 | 5.55e-01 | 92.4% | 81.5% |
| 5012830 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 65.0 | 5.41e-01 | 100.0% | 68.7% |
| 5012552 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 63.0 | 5.51e-01 | 98.5% | 64.0% |
| 5081145 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 65.0 | 5.88e-01 | 100.0% | 73.3% |
| 4288723 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.72 | 61.0 | 5.90e-01 | 97.0% | 82.7% |
| 5035746 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 64.0 | 4.88e-01 | 100.0% | 74.8% |
| 4458321 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.72 | 54.0 | 5.46e-01 | 92.4% | 80.0% |
| 3801700 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 64.0 | 4.16e-01 | 100.0% | 39.3% |
| 5012545 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.72 | 60.0 | 5.46e-01 | 92.4% | 68.9% |
| 4463034 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.72 | 64.0 | 6.17e-01 | 100.0% | 88.0% |
| 4341488 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.70 | 62.0 | 5.96e-01 | 100.0% | 90.7% |
| 4584501 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.69 | 62.0 | 5.84e-01 | 100.0% | 82.5% |
| 3659815 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 58.0 | 5.47e-01 | 93.9% | 89.9% |
| 4065889 | 2007.1.12.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase | 0.69 | 61.0 | 3.97e-01 | 98.5% | 23.9% |
| 4209293 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.68 | 61.0 | 5.71e-01 | 100.0% | 82.5% |
| 5045436 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 60.0 | 4.98e-01 | 100.0% | 56.6% |
| 4085660 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.67 | 59.0 | 5.61e-01 | 100.0% | 82.5% |
| 3179184 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 58.0 | 5.27e-01 | 100.0% | 83.3% |
| 3785641 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 52.0 | 5.06e-01 | 90.9% | 89.3% |
| 4461304 | 2.1.1.88 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD2 | 0.62 | 51.0 | 4.69e-01 | 100.0% | 76.8% |
| 4003370 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 45.0 | 4.41e-01 | 90.9% | 73.3% |
| 5008548 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 47.0 | 4.22e-01 | 93.9% | 78.9% |
| 4976993 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.56 | 48.0 | 3.87e-01 | 100.0% | 79.3% |
| 5050253 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.55 | 43.0 | 3.37e-01 | 90.9% | 38.0% |
| 3962098 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.53 | 42.0 | 4.32e-01 | 89.4% | 100.0% |
| 3613411 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.52 | 41.0 | 3.20e-01 | 89.4% | 40.0% |
| 5021698 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.51 | 43.0 | 2.98e-01 | 100.0% | 43.0% |
D2
high
residues 113-170
Domain cluster:
rep: IMGVR_UViG_3300006807_000001-3300006807-Ga0079288_10000438__D352-409