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IMGVR_UViG_3300006736_000497-3300006736-Ga0098033_100159816
Arc-VirIMGVR_UViG_3300006736_000497-3300006736-Ga0098033_100159816
Identity
- Kingdom:
- archaea
Quality
91.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-54
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vsmA03 | 2.60.40.4340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.73 | 59.0 | 4.59e-01 | 100.0% | 40.4% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.73 | 54.0 | 4.64e-01 | 90.2% | 49.3% |
| 2ymsB00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.73 | 54.0 | 4.42e-01 | 85.4% | 44.6% |
| 3l9rA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.71 | 60.0 | 3.98e-01 | 100.0% | 69.7% |
| 4immA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 52.0 | 3.08e-01 | 87.8% | 10.0% |
| 1yvuA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.69 | 55.0 | 3.48e-01 | 90.2% | 97.2% |
| 4ffeX00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.66 | 52.0 | 3.54e-01 | 87.8% | 26.0% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 52.0 | 3.08e-01 | 92.7% | 21.7% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.65 | 47.0 | 3.83e-01 | 90.2% | 40.2% |
| 1r57A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.65 | 48.0 | 3.63e-01 | 82.9% | 42.2% |
| 1pqzA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.64 | 47.0 | 3.39e-01 | 82.9% | 31.4% |
| 3fzxA00 | 2.40.360.20 | Mainly Beta › Beta Barrel › YmcC-like fold › | 0.63 | 50.0 | 3.19e-01 | 90.2% | 22.2% |
| 2wm1A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 51.0 | 3.03e-01 | 92.7% | 84.6% |
| 8adlB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 54.0 | 3.20e-01 | 100.0% | 28.9% |
| 3zqsA02 | 3.10.110.20 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › RWD domain-like | 0.61 | 48.0 | 3.86e-01 | 97.6% | 54.1% |
| 1q7rA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.61 | 43.0 | 2.77e-01 | 75.6% | 23.3% |
| 5cw7B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.60 | 47.0 | 3.79e-01 | 95.1% | 47.9% |
| 2fhxA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 49.0 | 3.07e-01 | 100.0% | 32.7% |
| 2vpiA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.58 | 40.0 | 2.67e-01 | 75.6% | 29.9% |
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.57 | 46.0 | 4.01e-01 | 100.0% | 87.8% |
| 2opcA00 | 2.60.40.2510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 47.0 | 3.48e-01 | 100.0% | 65.2% |
| 2pn2A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 42.0 | 3.01e-01 | 87.8% | 29.2% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.55 | 42.0 | 3.58e-01 | 92.7% | 48.6% |
| 2d0bA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.55 | 46.0 | 3.70e-01 | 100.0% | 57.3% |
| 2xstA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 42.0 | 3.07e-01 | 100.0% | 30.2% |
| 3dlbA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 40.0 | 2.76e-01 | 85.4% | 88.6% |
| 3io5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 2.56e-01 | 90.2% | 13.7% |
| 4ifdI02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 38.0 | 2.83e-01 | 87.8% | 96.5% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 35.0 | 2.89e-01 | 70.7% | 31.4% |
| 1wczA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 38.0 | 3.04e-01 | 92.7% | 61.7% |
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 41.0 | 3.14e-01 | 100.0% | 41.3% |
| 2dluA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 35.0 | 2.72e-01 | 75.6% | 60.4% |
| 3gocA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.51 | 40.0 | 2.63e-01 | 100.0% | 26.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928895 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.96 | 88.0 | 5.15e-01 | 100.0% | 14.9% |
| 3980770 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.88 | 74.0 | 4.86e-01 | 100.0% | 23.6% |
| 3386275 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.74 | 58.0 | 5.12e-01 | 92.7% | 60.0% |
| 1141859 | 5.1.10.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF6849 | 0.72 | 54.0 | 4.54e-01 | 90.2% | 47.2% |
| 3684135 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.72 | 55.0 | 3.24e-01 | 90.2% | 10.6% |
| 5068839 | 2007.1.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › SNO | 0.71 | 48.0 | 3.03e-01 | 70.7% | 25.4% |
| 3269373 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 49.0 | 3.81e-01 | 80.5% | 33.3% |
| 3322065 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.70 | 54.0 | 3.23e-01 | 90.2% | 11.6% |
| 4548121 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.70 | 48.0 | 4.08e-01 | 90.2% | 42.9% |
| 3455239 | 292.2.1.12 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Calmod_bind_C | 0.69 | 51.0 | 4.52e-01 | 90.2% | 55.0% |
| 3460631 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 50.0 | 3.48e-01 | 80.5% | 49.7% |
| 4941102 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.69 | 54.0 | 3.25e-01 | 90.2% | 12.0% |
| 3550096 | 5.1.4.425 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR19_1st | 0.68 | 54.0 | 3.17e-01 | 90.2% | 10.6% |
| 3979951 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.68 | 54.0 | 3.85e-01 | 90.2% | 30.0% |
| 3917082 | 5.1.4.167 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st | 0.67 | 53.0 | 3.11e-01 | 90.2% | 10.3% |
| 3660003 | 5.1.10.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › ANAPC4_WD40 | 0.65 | 53.0 | 4.35e-01 | 95.1% | 85.0% |
| 3611830 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 54.0 | 3.05e-01 | 95.1% | 15.5% |
| 3391875 | 3787.3.1.1 ↗ | alpha bundles › HAD superfamily helical bundle insertion domain › Insertion domain in cytosolic IMP-GMP specific 5'-nucleotidase › Insertion domain in cytosolic IMP-GMP specific 5'-nucleotidase › 5_nucleotid | 0.64 | 47.0 | 3.11e-01 | 90.2% | 18.9% |
| 3813129 | 3787.3.1.1 ↗ | alpha bundles › HAD superfamily helical bundle insertion domain › Insertion domain in cytosolic IMP-GMP specific 5'-nucleotidase › Insertion domain in cytosolic IMP-GMP specific 5'-nucleotidase › 5_nucleotid | 0.64 | 46.0 | 3.18e-01 | 90.2% | 21.3% |
| 3703728 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.63 | 47.0 | 2.82e-01 | 90.2% | 10.8% |
| 3268534 | 5.1.5.126 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_VPS8 | 0.62 | 50.0 | 2.95e-01 | 95.1% | 19.5% |
| 3973990 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.62 | 48.0 | 3.62e-01 | 100.0% | 33.6% |
| 3739782 | 9.2.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › FBO_C | 0.60 | 47.0 | 3.38e-01 | 100.0% | 32.9% |
| None | — | 0.56 | 41.0 | 2.71e-01 | 85.4% | 65.3% |