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IMGVR_UViG_3300006810_000795-3300006810-Ga0070754_100017757
Arc-VirIMGVR_UViG_3300006810_000795-3300006810-Ga0070754_100017757
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-153
Domain cluster:
rep: OQ067477.1__WCD44161.1__Lumi_022__00022__D8-128
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05100.18 best | Phage_tail_L | 91.5 | 6.60e-26 | 85.3% | 57.3% |
D2
medium
residues 215-306
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wxrA03 | 3.30.160.280 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.72 | 43.0 | 4.67e-01 | 79.3% | 72.4% |
| 2k6pA00 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.62 | 36.0 | 3.82e-01 | 78.3% | 63.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4009007 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.79 | 42.0 | 5.54e-01 | 77.2% | 96.0% |
| 3513207 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 38.0 | 3.62e-01 | 76.1% | 82.7% |