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IMGVR_UViG_3300006810_013543-3300006810-Ga0070754_1000302913
Arc-VirIMGVR_UViG_3300006810_013543-3300006810-Ga0070754_1000302913
Identity
- Kingdom:
- archaea
Quality
68.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-121
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6nd0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 36.0 | 3.81e-01 | 70.2% | 76.5% |
| 1kg2A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.52 | 40.0 | 4.06e-01 | 83.3% | 83.0% |
| 1c00A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 39.0 | 2.61e-01 | 80.7% | 63.6% |
| 3ukmA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 36.0 | 2.83e-01 | 71.9% | 42.5% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.51 | 37.0 | 3.59e-01 | 76.3% | 91.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3781090 | 7010.1.1.4 ↗ | alpha arrays › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator › HTH_76 | 0.60 | 31.0 | 3.55e-01 | 71.1% | 67.5% |
| 3479143 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.54 | 37.0 | 3.54e-01 | 71.1% | 65.2% |
| 3599717 | 3193.1.1.0 ↗ | alpha arrays › HopAB effectors Pto-binding domain-related › HopAB effectors Pto-binding domain-related › HopAB effectors Pto-binding domain-related | 0.52 | 36.0 | 3.50e-01 | 70.2% | 91.2% |
| 3987637 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.52 | 36.0 | 3.56e-01 | 70.2% | 66.7% |
| 3927682 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.51 | 34.0 | 3.21e-01 | 71.1% | 55.0% |
| 4997427 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 29.0 | 3.16e-01 | 80.7% | 67.8% |