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IMGVR_UViG_3300006857_000025-3300006857-Ga0079041_10003706
Arc-VirIMGVR_UViG_3300006857_000025-3300006857-Ga0079041_10003706
Identity
- Kingdom:
- archaea
Quality
74.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-55
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zqsA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.69 | 44.0 | 3.62e-01 | 100.0% | 34.1% |
| 3jxvA01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.64 | 52.0 | 4.03e-01 | 100.0% | 87.1% |
| 3rpcA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.63 | 37.0 | 2.29e-01 | 100.0% | 8.8% |
| 1jj2L00 | 3.40.1120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15 | 0.61 | 53.0 | 3.51e-01 | 100.0% | 50.5% |
| 1sz7A00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.59 | 50.0 | 3.46e-01 | 100.0% | 47.8% |
| 3k59A07 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.59 | 48.0 | 3.56e-01 | 100.0% | 76.8% |
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.55 | 41.0 | 2.95e-01 | 100.0% | 27.6% |
| 4bbyA03 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.55 | 47.0 | 3.48e-01 | 100.0% | 96.7% |
| 6z30A01 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.54 | 41.0 | 3.04e-01 | 100.0% | 29.3% |
| 3pm9A02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 45.0 | 3.33e-01 | 100.0% | 96.7% |
| 3amuA02 | 2.40.50.1010 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 39.0 | 2.96e-01 | 95.6% | 52.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5037982 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.76 | 64.0 | 5.27e-01 | 93.3% | 84.8% |
| 5060311 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.73 | 63.0 | 5.17e-01 | 100.0% | 82.4% |
| 5067699 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.72 | 62.0 | 5.13e-01 | 97.8% | 85.0% |
| 5067701 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.72 | 59.0 | 4.92e-01 | 93.3% | 84.8% |
| 3624656 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.68 | 43.0 | 3.68e-01 | 100.0% | 38.7% |
| 3927514 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.63 | 52.0 | 3.88e-01 | 100.0% | 76.2% |
| 3355655 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.63 | 52.0 | 3.93e-01 | 100.0% | 87.5% |
| 3674642 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.62 | 53.0 | 4.00e-01 | 100.0% | 85.2% |
| 4059415 | 10.12.1.17 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N | 0.61 | 49.0 | 3.00e-01 | 100.0% | 53.5% |
| 3647877 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.60 | 49.0 | 3.47e-01 | 93.3% | 30.7% |
| 3763394 | 389.2.1.1 ↗ | few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors › TIL | 0.60 | 37.0 | 2.88e-01 | 100.0% | 25.7% |
| 3270897 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.57 | 46.0 | 3.58e-01 | 100.0% | 87.0% |
| 3579353 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 49.0 | 3.59e-01 | 100.0% | 37.5% |
| None | — | 0.54 | 47.0 | 2.55e-01 | 100.0% | 50.2% | |
| 3696332 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.54 | 46.0 | 3.28e-01 | 97.8% | 46.7% |
| 3596169 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.53 | 43.0 | 3.04e-01 | 97.8% | 69.4% |
| 5065288 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.53 | 40.0 | 2.53e-01 | 91.1% | 14.5% |
| 3196012 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 45.0 | 3.71e-01 | 100.0% | 54.2% |
| 4962569 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 42.0 | 3.02e-01 | 100.0% | 61.4% |
| 3331604 | 7579.1.1.28 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S28 | 0.50 | 39.0 | 2.58e-01 | 97.8% | 19.5% |