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IMGVR_UViG_3300006876_000060-3300006876-Ga0079217_1000011918
Arc-VirIMGVR_UViG_3300006876_000060-3300006876-Ga0079217_1000011918
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-51_150-254
Domain cluster:
rep: uncharacterized_peptidase_C1-like_protein__YP_003986985__Acanthamoeba_polyphaga_mimivirus__212035__D36-61_173-280
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00112.30 best | Peptidase_C1 | 48.9 | 1.30e-12 | 94.3% | 42.3% |
| PF13529.14 | Peptidase_C39_2 | 24.7 | 3.60e-05 | 90.2% | 46.2% |
D2
medium
residues 52-149
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oisB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.95 | 92.0 | 6.36e-01 | 100.0% | 41.2% |
| 1xkgA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.88 | 74.0 | 5.06e-01 | 100.0% | 28.9% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.85 | 73.0 | 4.83e-01 | 100.0% | 24.8% |
| 1jqpA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.84 | 74.0 | 5.47e-01 | 100.0% | 39.9% |
| 6zq3A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.84 | 74.0 | 5.62e-01 | 100.0% | 43.8% |
| 2wbfX00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.80 | 75.0 | 5.36e-01 | 100.0% | 37.0% |
| 3pw3D00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.80 | 74.0 | 4.94e-01 | 100.0% | 45.9% |
| 5fpwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.78 | 73.0 | 5.09e-01 | 100.0% | 34.9% |
| 1deuB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.78 | 73.0 | 5.23e-01 | 100.0% | 41.4% |
| 1sp4B00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.74 | 53.0 | 4.13e-01 | 74.5% | 49.3% |
| 3f8tA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 45.0 | 3.24e-01 | 96.9% | 26.3% |
| 2pejA00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.56 | 35.0 | 3.46e-01 | 99.0% | 56.0% |
| 4gr6B00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.55 | 35.0 | 3.43e-01 | 99.0% | 58.1% |
| 1iufA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 29.0 | 3.36e-01 | 87.8% | 75.0% |
| 1w98B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 40.0 | 3.59e-01 | 82.7% | 84.4% |
| 4if8B01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.51 | 45.0 | 3.32e-01 | 99.0% | 70.1% |
| 3i3tA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 46.0 | 3.24e-01 | 100.0% | 41.3% |
| 2h4pA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.51 | 44.0 | 3.35e-01 | 99.0% | 77.4% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960361 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.96 | 90.0 | 6.19e-01 | 100.0% | 33.9% |
| 1165617 | 219.1.1.110 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 | 0.95 | 73.0 | 6.56e-01 | 81.6% | 60.9% |
| 3723538 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.91 | 87.0 | 5.84e-01 | 100.0% | 36.1% |
| 3277753 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.89 | 80.0 | 5.67e-01 | 100.0% | 36.1% |
| 3234755 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.88 | 74.0 | 5.44e-01 | 100.0% | 37.3% |
| 3940207 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.87 | 75.0 | 5.40e-01 | 100.0% | 36.1% |
| 3470973 | 219.1.1.110 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 | 0.86 | 75.0 | 5.43e-01 | 100.0% | 36.9% |
| 3676121 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.86 | 74.0 | 5.58e-01 | 100.0% | 41.4% |
| 5013895 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.86 | 82.0 | 5.34e-01 | 100.0% | 32.7% |
| 3392327 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.85 | 74.0 | 5.34e-01 | 100.0% | 36.0% |
| 3938586 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.85 | 73.0 | 5.24e-01 | 100.0% | 34.2% |
| 3798944 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.85 | 75.0 | 5.40e-01 | 100.0% | 36.4% |
| 4429823 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.85 | 74.0 | 5.03e-01 | 100.0% | 28.7% |
| 4978305 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.85 | 79.0 | 5.42e-01 | 100.0% | 32.5% |
| 4127832 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.85 | 75.0 | 5.16e-01 | 100.0% | 30.7% |
| 4391291 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.85 | 75.0 | 5.47e-01 | 100.0% | 38.3% |
| 3617140 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.84 | 73.0 | 5.03e-01 | 100.0% | 29.4% |
| 3940173 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.84 | 71.0 | 5.26e-01 | 100.0% | 37.6% |
| 3264598 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.84 | 75.0 | 5.76e-01 | 100.0% | 45.6% |
| 5064725 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.84 | 76.0 | 5.24e-01 | 100.0% | 32.1% |
| 3226100 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.84 | 77.0 | 5.44e-01 | 100.0% | 35.6% |
| 5034502 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.84 | 75.0 | 5.61e-01 | 100.0% | 41.8% |
| None | — | 0.84 | 70.0 | 4.95e-01 | 100.0% | 31.6% | |
| 5016484 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.83 | 78.0 | 5.27e-01 | 100.0% | 31.1% |
| 2076995 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.83 | 76.0 | 5.55e-01 | 100.0% | 40.8% |
| 4448672 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.82 | 75.0 | 5.14e-01 | 100.0% | 30.8% |
| 3791026 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.82 | 73.0 | 4.93e-01 | 100.0% | 28.7% |
| 4029993 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.81 | 76.0 | 4.88e-01 | 100.0% | 23.6% |
| 5080542 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.81 | 77.0 | 5.45e-01 | 100.0% | 37.7% |
| 4030613 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.81 | 76.0 | 5.40e-01 | 100.0% | 37.0% |
| 3481577 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.81 | 76.0 | 5.56e-01 | 100.0% | 81.7% |
| 3250297 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.81 | 75.0 | 5.28e-01 | 100.0% | 38.2% |
| 3260560 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.80 | 75.0 | 5.34e-01 | 100.0% | 38.9% |
| 1165734 | 219.1.1.17 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1_2 | 0.80 | 75.0 | 5.26e-01 | 100.0% | 58.7% |
| 3830240 | 109.4.1.84 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › API5 | 0.80 | 74.0 | 4.49e-01 | 100.0% | 19.8% |
| 3832249 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 73.0 | 5.17e-01 | 100.0% | 41.8% |
| 4663619 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.79 | 74.0 | 4.97e-01 | 100.0% | 30.2% |
| 3261680 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.79 | 73.0 | 5.09e-01 | 100.0% | 34.3% |
| 3891882 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.78 | 73.0 | 5.12e-01 | 100.0% | 37.9% |
| 5005855 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.78 | 73.0 | 5.45e-01 | 100.0% | 46.7% |
| 3656345 | 219.1.1.2 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 | 0.77 | 71.0 | 4.77e-01 | 100.0% | 38.5% |
| 3433434 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.77 | 63.0 | 4.73e-01 | 100.0% | 39.1% |
| 3806027 | 219.1.1.124 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF29469 | 0.74 | 68.0 | 5.71e-01 | 99.0% | 61.3% |
| 3419895 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.70 | 60.0 | 4.54e-01 | 100.0% | 40.4% |
| 3452041 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.68 | 57.0 | 4.10e-01 | 100.0% | 33.0% |
| 3547168 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.61 | 46.0 | 4.17e-01 | 98.0% | 58.5% |
| 4024278 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.61 | 45.0 | 4.62e-01 | 98.0% | 81.1% |
| 3437797 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 46.0 | 3.50e-01 | 100.0% | 35.2% |
| 3251563 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.56 | 31.0 | 2.87e-01 | 96.9% | 37.8% |
| 3196755 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.51 | 38.0 | 2.71e-01 | 78.6% | 95.8% |
| 3965596 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.50 | 36.0 | 3.01e-01 | 75.5% | 71.1% |