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IMGVR_UViG_3300006876_000079-3300006876-Ga0079217_100040564
Arc-VirIMGVR_UViG_3300006876_000079-3300006876-Ga0079217_100040564
Identity
- Kingdom:
- archaea
Quality
79.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-46
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gatA00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.75 | 57.0 | 5.14e-01 | 93.5% | 59.1% |
| 2corA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.75 | 54.0 | 4.55e-01 | 89.1% | 45.6% |
| 2gviA03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.73 | 49.0 | 5.36e-01 | 80.4% | 94.1% |
| 1y0uA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 43.0 | 3.42e-01 | 100.0% | 32.6% |
| 2gauA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 42.0 | 3.45e-01 | 100.0% | 34.6% |
| 3b02A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 41.0 | 3.31e-01 | 100.0% | 32.9% |
| 2cuqA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.67 | 55.0 | 4.58e-01 | 91.3% | 58.7% |
| 2miuA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.66 | 48.0 | 3.86e-01 | 89.1% | 36.7% |
| 4ccgY00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 58.0 | 5.13e-01 | 100.0% | 94.0% |
| 3ihpA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 51.0 | 3.91e-01 | 97.8% | 36.2% |
| 4n06A02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.64 | 44.0 | 2.71e-01 | 71.7% | 15.5% |
| 1vx2d00 | 4.10.830.10 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal Protein S14/S29 | 0.64 | 47.0 | 4.58e-01 | 100.0% | 73.1% |
| 6u4mA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.63 | 54.0 | 4.90e-01 | 100.0% | 83.1% |
| 2d8xA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.63 | 50.0 | 4.43e-01 | 91.3% | 67.1% |
| 4jcjB01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.62 | 55.0 | 4.90e-01 | 100.0% | 73.8% |
| 2ds5A00 | 6.20.220.10 | Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › ClpX chaperone, C4-type zinc finger domain | 0.61 | 44.0 | 4.49e-01 | 91.3% | 88.4% |
| 1x62A01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.59 | 49.0 | 4.61e-01 | 97.8% | 86.7% |
| 2d8yA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.59 | 50.0 | 4.36e-01 | 97.8% | 73.6% |
| 2dj7A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.59 | 52.0 | 4.36e-01 | 100.0% | 65.0% |
| 2jrjA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 44.0 | 4.32e-01 | 93.5% | 76.9% |
| 3lkdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 39.0 | 2.55e-01 | 100.0% | 34.8% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5027852 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.86 | 54.0 | 6.35e-01 | 82.6% | 100.0% |
| 5061512 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.80 | 60.0 | 6.36e-01 | 97.8% | 95.0% |
| 3268530 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.79 | 59.0 | 6.26e-01 | 91.3% | 92.5% |
| 5021070 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.78 | 54.0 | 6.00e-01 | 84.8% | 97.1% |
| 4410490 | 3961.1.1.0 ↗ | 0.77 | 54.0 | 4.17e-01 | 91.3% | 34.0% | |
| 3922147 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.75 | 48.0 | 5.45e-01 | 76.1% | 100.0% |
| 3304089 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 53.0 | 5.36e-01 | 87.0% | 77.8% |
| 3574433 | 604.1.1.125 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SYNRG_C | 0.74 | 59.0 | 4.09e-01 | 95.7% | 27.3% |
| 3934619 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.74 | 51.0 | 5.65e-01 | 80.4% | 97.1% |
| 3928404 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 53.0 | 5.52e-01 | 93.5% | 90.0% |
| 3352595 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.74 | 47.0 | 5.27e-01 | 76.1% | 100.0% |
| 3336883 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.72 | 57.0 | 5.75e-01 | 95.7% | 88.9% |
| 5052621 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 62.0 | 5.84e-01 | 97.8% | 98.2% |
| 4975289 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 59.0 | 5.48e-01 | 97.8% | 91.7% |
| 3927094 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.71 | 53.0 | 4.59e-01 | 93.5% | 52.9% |
| 3511728 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.70 | 51.0 | 5.19e-01 | 89.1% | 80.0% |
| 3252156 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.70 | 50.0 | 5.32e-01 | 84.8% | 87.5% |
| 3246918 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.70 | 50.0 | 5.47e-01 | 84.8% | 100.0% |
| 3925306 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 59.0 | 5.08e-01 | 97.8% | 76.0% |
| 3395505 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.70 | 54.0 | 5.46e-01 | 93.5% | 86.7% |
| 3833476 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.70 | 53.0 | 4.86e-01 | 82.6% | 73.3% |
| 3883588 | 604.1.1.125 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SYNRG_C | 0.70 | 58.0 | 3.93e-01 | 95.7% | 25.6% |
| 4011070 | 376.1.1.106 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29452 | 0.70 | 58.0 | 4.97e-01 | 100.0% | 95.0% |
| 4662849 | 377.1.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 | 0.68 | 49.0 | 4.93e-01 | 100.0% | 77.1% |
| 3932949 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.67 | 54.0 | 4.70e-01 | 97.8% | 71.2% |
| 3519190 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.67 | 52.0 | 5.28e-01 | 97.8% | 88.9% |
| 3993220 | 376.1.2.24 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › RH_dom | 0.66 | 56.0 | 5.29e-01 | 95.7% | 83.6% |
| 3522976 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 56.0 | 4.76e-01 | 100.0% | 73.8% |
| None | — | 0.66 | 55.0 | 4.58e-01 | 97.8% | 85.9% | |
| 3435304 | 376.1.1.52 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › LIM | 0.66 | 57.0 | 5.09e-01 | 97.8% | 75.4% |
| 5067072 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.66 | 52.0 | 5.15e-01 | 97.8% | 80.0% |
| 3941278 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.66 | 54.0 | 4.53e-01 | 97.8% | 76.5% |
| 3394712 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 45.0 | 4.95e-01 | 78.3% | 97.1% |
| 3631424 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.65 | 55.0 | 4.52e-01 | 100.0% | 83.3% |
| 3256364 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.65 | 56.0 | 4.94e-01 | 100.0% | 75.7% |
| 3617313 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 45.0 | 4.85e-01 | 82.6% | 97.1% |
| 3790267 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.64 | 55.0 | 4.73e-01 | 100.0% | 100.0% |
| 3273468 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.64 | 55.0 | 4.01e-01 | 100.0% | 56.3% |
| 3929205 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.63 | 54.0 | 4.52e-01 | 97.8% | 62.5% |
| 3618279 | 376.1.1.122 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf_RING_Vps8 | 0.63 | 51.0 | 4.81e-01 | 97.8% | 75.0% |
| 3394478 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.62 | 50.0 | 5.07e-01 | 93.5% | 100.0% |
| 3475130 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 53.0 | 4.66e-01 | 97.8% | 80.0% |
| 3409760 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.62 | 50.0 | 4.68e-01 | 93.5% | 78.3% |
| 3601303 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 41.0 | 2.42e-01 | 95.7% | 7.9% |
| 3712912 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.57 | 49.0 | 4.64e-01 | 97.8% | 94.5% |
| 3800804 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 3.53e-01 | 100.0% | 81.7% |
| 4028685 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.56 | 35.0 | 2.74e-01 | 93.5% | 27.3% |
| 4964837 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 39.0 | 2.50e-01 | 78.3% | 39.1% |
| 3784180 | 3416.1.1.1 ↗ | a+b complex topology › Mediator co-activator domain 1 of Gal11/med15 › Mediator co-activator domain 1 of Gal11/med15 › Mediator co-activator domain 1 of Gal11/med15 › Gal11_ABD1 | 0.54 | 38.0 | 3.16e-01 | 73.9% | 44.7% |
| 5062870 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 38.0 | 3.11e-01 | 100.0% | 40.0% |
| 4061222 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 44.0 | 2.43e-01 | 100.0% | 14.0% |
| 4951714 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.52 | 39.0 | 2.36e-01 | 89.1% | 72.8% |