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IMGVR_UViG_3300006894_000028-3300006894-Ga0079215_100038294
Arc-VirIMGVR_UViG_3300006894_000028-3300006894-Ga0079215_100038294
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-98
Domain cluster:
rep: MW960030.1__QWY82978.1__X__00024__D5-103
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02195.27 best | ParB_N | 34.2 | 3.30e-08 | 95.5% | 74.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vk1A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.81 | 70.0 | 6.61e-01 | 93.2% | 78.4% |
| 1xw3A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.81 | 68.0 | 6.66e-01 | 90.9% | 91.7% |
| 2hwjA01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.76 | 65.0 | 5.74e-01 | 92.0% | 76.2% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 40.0 | 3.27e-01 | 85.2% | 76.1% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945776 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.95 | 90.0 | 8.73e-01 | 98.9% | 95.8% |
| 5082449 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.94 | 88.0 | 8.72e-01 | 96.6% | 97.8% |
| 4928673 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.93 | 78.0 | 8.23e-01 | 87.5% | 100.0% |
| 5082298 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.90 | 76.0 | 7.60e-01 | 88.6% | 100.0% |
| 3971842 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.90 | 74.0 | 6.30e-01 | 85.2% | 65.4% |
| 3943767 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.89 | 80.0 | 8.19e-01 | 95.5% | 98.8% |
| 3279914 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.89 | 76.0 | 6.02e-01 | 89.8% | 74.5% |
| 4927766 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.89 | 70.0 | 7.15e-01 | 81.8% | 88.2% |
| 5073612 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.89 | 84.0 | 7.82e-01 | 100.0% | 89.5% |
| 4940273 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.89 | 69.0 | 7.40e-01 | 80.7% | 100.0% |
| 5032171 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.88 | 81.0 | 8.26e-01 | 96.6% | 100.0% |
| 4929132 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.87 | 80.0 | 7.78e-01 | 96.6% | 97.9% |
| 5071247 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.87 | 79.0 | 7.12e-01 | 96.6% | 98.3% |
| 3280315 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.86 | 79.0 | 8.03e-01 | 97.7% | 100.0% |
| 4683061 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.86 | 79.0 | 7.72e-01 | 100.0% | 90.5% |
| 4970064 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.86 | 68.0 | 7.13e-01 | 83.0% | 97.5% |
| 4958363 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.86 | 72.0 | 7.36e-01 | 88.6% | 98.8% |
| 4116056 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.86 | 70.0 | 7.18e-01 | 88.6% | 89.4% |
| 3587492 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.85 | 69.0 | 6.64e-01 | 86.4% | 80.0% |
| 4344404 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.85 | 74.0 | 7.06e-01 | 92.0% | 83.0% |
| 2841795 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.85 | 74.0 | 7.38e-01 | 93.2% | 94.4% |
| 1842312 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.85 | 69.0 | 7.04e-01 | 86.4% | 88.4% |
| 4946472 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.84 | 66.0 | 6.95e-01 | 83.0% | 97.5% |
| 2543651 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.82 | 71.0 | 7.10e-01 | 92.0% | 95.5% |
| 5071270 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.82 | 73.0 | 7.48e-01 | 96.6% | 100.0% |
| 4862436 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.82 | 75.0 | 7.33e-01 | 98.9% | 98.9% |
| 5057878 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.82 | 77.0 | 6.45e-01 | 98.9% | 84.9% |
| 3772471 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.82 | 65.0 | 6.50e-01 | 84.1% | 90.0% |
| 5000279 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.82 | 76.0 | 6.16e-01 | 97.7% | 68.7% |
| 3942579 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.81 | 61.0 | 6.53e-01 | 78.4% | 96.0% |
| 2387795 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.81 | 70.0 | 7.06e-01 | 95.5% | 92.0% |
| 3992892 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.81 | 64.0 | 6.72e-01 | 83.0% | 96.2% |
| 3946729 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.81 | 67.0 | 6.59e-01 | 88.6% | 93.7% |
| 3948471 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.81 | 74.0 | 6.72e-01 | 100.0% | 85.2% |
| 85732 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.80 | 68.0 | 6.07e-01 | 90.9% | 73.6% |
| 5030163 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.80 | 73.0 | 6.68e-01 | 98.9% | 100.0% |
| 5052297 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.80 | 69.0 | 7.07e-01 | 96.6% | 96.5% |
| 4934171 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.80 | 74.0 | 6.19e-01 | 98.9% | 85.7% |
| 2061501 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.79 | 70.0 | 6.74e-01 | 95.5% | 83.8% |
| 5010421 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.79 | 72.0 | 6.34e-01 | 97.7% | 83.9% |
| 3278076 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.79 | 68.0 | 6.75e-01 | 92.0% | 97.8% |
| 4931651 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.79 | 67.0 | 6.56e-01 | 90.9% | 85.3% |
| 4370861 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.79 | 72.0 | 6.65e-01 | 100.0% | 87.3% |
| 5083737 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.78 | 66.0 | 5.47e-01 | 90.9% | 94.0% |
| 3602844 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.78 | 66.0 | 5.86e-01 | 89.8% | 69.2% |
| 4996594 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.78 | 73.0 | 5.83e-01 | 100.0% | 95.0% |
| 3723395 | 876.1.1.6 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418 | 0.77 | 69.0 | 6.27e-01 | 100.0% | 94.1% |
| 5052345 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.76 | 69.0 | 6.87e-01 | 100.0% | 97.8% |
| 3686504 | 876.1.1.6 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418 | 0.76 | 68.0 | 6.44e-01 | 100.0% | 97.1% |
| 4931684 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.74 | 59.0 | 4.64e-01 | 84.1% | 66.3% |
| 3960934 | 876.1.1.8 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › VapB | 0.74 | 57.0 | 5.99e-01 | 84.1% | 88.7% |
| 5081788 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.74 | 65.0 | 6.04e-01 | 96.6% | 95.5% |
| 3602315 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.73 | 55.0 | 4.34e-01 | 79.5% | 100.0% |
| 5018770 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.72 | 65.0 | 5.74e-01 | 98.9% | 91.2% |
| 5035573 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.70 | 55.0 | 5.06e-01 | 84.1% | 77.4% |
| 5075504 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.70 | 57.0 | 5.67e-01 | 87.5% | 100.0% |
| 3393077 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.57 | 38.0 | 3.26e-01 | 72.7% | 40.7% |
| 4112374 | 298.4.1.5 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › ATP-synt_B | 0.52 | 43.0 | 3.21e-01 | 89.8% | 37.8% |
| 4244672 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.50 | 40.0 | 3.10e-01 | 84.1% | 66.3% |
D2
medium
residues 105-142
Domain cluster:
representative
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d1lA00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.75 | 57.0 | 4.99e-01 | 86.8% | 54.1% |
| 1znnA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 61.0 | 3.68e-01 | 100.0% | 14.7% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 4.71e-01 | 100.0% | 45.5% |
| 3c57B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 59.0 | 5.53e-01 | 97.4% | 85.7% |
| 3oc2A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.69 | 55.0 | 3.63e-01 | 94.7% | 20.2% |
| 2ofyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 57.0 | 4.81e-01 | 100.0% | 54.3% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 4.52e-01 | 100.0% | 43.3% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 55.0 | 3.59e-01 | 100.0% | 20.4% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 53.0 | 4.80e-01 | 100.0% | 65.6% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 55.0 | 4.36e-01 | 100.0% | 43.8% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 52.0 | 5.04e-01 | 94.7% | 77.8% |
| 1ojlA03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 53.0 | 5.13e-01 | 97.4% | 83.0% |
| 5wxuD01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 55.0 | 3.45e-01 | 100.0% | 59.8% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 51.0 | 4.34e-01 | 100.0% | 50.0% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 4.53e-01 | 100.0% | 55.7% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 54.0 | 4.89e-01 | 100.0% | 74.1% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 55.0 | 4.49e-01 | 100.0% | 59.0% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 54.0 | 4.54e-01 | 100.0% | 56.0% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 4.49e-01 | 100.0% | 54.2% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 4.61e-01 | 100.0% | 67.2% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 51.0 | 4.47e-01 | 97.4% | 57.4% |
| 3bs3A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 53.0 | 4.74e-01 | 97.4% | 61.7% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.66 | 49.0 | 4.02e-01 | 100.0% | 43.6% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 4.78e-01 | 100.0% | 74.1% |
| 2elhA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 4.44e-01 | 100.0% | 62.1% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.34e-01 | 97.4% | 58.2% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.46e-01 | 100.0% | 61.9% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 52.0 | 4.69e-01 | 94.7% | 69.1% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 43.0 | 4.17e-01 | 73.7% | 82.6% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 48.0 | 4.12e-01 | 92.1% | 50.7% |
| 1dliA03 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.63 | 44.0 | 3.48e-01 | 78.9% | 32.2% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 48.0 | 4.62e-01 | 92.1% | 76.6% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 48.0 | 4.10e-01 | 100.0% | 48.8% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 51.0 | 5.07e-01 | 100.0% | 97.6% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 44.0 | 4.01e-01 | 78.9% | 63.8% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 45.0 | 4.23e-01 | 92.1% | 62.1% |
| 2fjrA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 49.0 | 4.11e-01 | 97.4% | 55.3% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 49.0 | 4.47e-01 | 97.4% | 69.6% |
| 2kt0A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 50.0 | 4.80e-01 | 100.0% | 85.1% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 48.0 | 4.66e-01 | 100.0% | 83.3% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 44.0 | 4.18e-01 | 100.0% | 71.7% |
| 3oceA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.60 | 43.0 | 3.89e-01 | 76.3% | 54.5% |
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.59 | 43.0 | 3.42e-01 | 86.8% | 46.9% |
| 1y7oB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.59 | 47.0 | 3.12e-01 | 94.7% | 23.0% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 3.53e-01 | 97.4% | 37.2% |
| 3w6zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.59 | 45.0 | 3.20e-01 | 86.8% | 86.8% |
| 1jswB03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.59 | 41.0 | 3.84e-01 | 76.3% | 62.0% |
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.59 | 45.0 | 3.38e-01 | 100.0% | 81.3% |
| 2ld5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 44.0 | 3.95e-01 | 100.0% | 68.7% |
| 3i71B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 39.0 | 3.54e-01 | 84.2% | 48.3% |
| 1pixA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 43.0 | 2.61e-01 | 86.8% | 26.1% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.57 | 42.0 | 2.93e-01 | 94.7% | 32.2% |
| 2de2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 42.0 | 2.74e-01 | 89.5% | 32.5% |
| 4u7bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 42.0 | 4.27e-01 | 100.0% | 97.4% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.55 | 45.0 | 4.44e-01 | 100.0% | 95.1% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 3.68e-01 | 100.0% | 63.4% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 42.0 | 4.04e-01 | 100.0% | 76.0% |
| 2x26A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 41.0 | 2.81e-01 | 97.4% | 34.6% |
| 3rd8A03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.53 | 41.0 | 3.85e-01 | 97.4% | 100.0% |
| 1tuoA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.52 | 44.0 | 3.19e-01 | 100.0% | 95.7% |
| 1vhxB00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.52 | 40.0 | 2.86e-01 | 92.1% | 92.8% |
| 6xzqA01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.50 | 38.0 | 2.69e-01 | 97.4% | 35.8% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.50 | 38.0 | 2.74e-01 | 100.0% | 53.5% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4970801 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.80 | 67.0 | 5.27e-01 | 100.0% | 47.1% |
| 3942028 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.76 | 63.0 | 4.90e-01 | 100.0% | 43.3% |
| 3290297 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.74 | 62.0 | 4.99e-01 | 100.0% | 48.8% |
| 3284225 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.73 | 61.0 | 4.91e-01 | 100.0% | 48.8% |
| 4137092 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.72 | 60.0 | 4.83e-01 | 100.0% | 48.8% |
| 4964802 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 57.0 | 5.09e-01 | 100.0% | 65.0% |
| 5041148 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 59.0 | 4.99e-01 | 100.0% | 55.7% |
| 3966238 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.71 | 59.0 | 4.67e-01 | 100.0% | 45.9% |
| 3989440 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.70 | 58.0 | 4.57e-01 | 100.0% | 43.3% |
| 3943494 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.70 | 57.0 | 4.58e-01 | 100.0% | 45.9% |
| 4159688 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.69 | 57.0 | 4.82e-01 | 100.0% | 55.7% |
| 4999897 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.68 | 57.0 | 4.67e-01 | 100.0% | 58.7% |
| 5063318 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.68 | 55.0 | 5.00e-01 | 97.4% | 70.9% |
| 4024167 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 53.0 | 4.70e-01 | 100.0% | 69.2% |
| 4370821 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.67 | 54.0 | 4.40e-01 | 100.0% | 45.9% |
| 3387117 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.67 | 54.0 | 4.44e-01 | 100.0% | 48.8% |
| 3286174 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.67 | 52.0 | 4.44e-01 | 100.0% | 52.0% |
| 4945903 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 53.0 | 4.92e-01 | 100.0% | 69.1% |
| 4606780 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.67 | 55.0 | 4.88e-01 | 100.0% | 70.0% |
| 3904156 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 57.0 | 5.43e-01 | 100.0% | 84.4% |
| 4012268 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.65 | 47.0 | 2.99e-01 | 84.2% | 14.0% |
| 3838024 | 101.1.1.18 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 | 0.65 | 48.0 | 4.87e-01 | 100.0% | 95.0% |
| 4588125 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.65 | 52.0 | 4.32e-01 | 100.0% | 53.8% |
| 3922864 | 101.1.1.96 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Neugrin | 0.65 | 52.0 | 4.66e-01 | 100.0% | 68.3% |
| 3962431 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.64 | 49.0 | 4.25e-01 | 100.0% | 52.0% |
| 3271918 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.64 | 49.0 | 4.33e-01 | 100.0% | 58.6% |
| 3968886 | 101.1.1.77 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_50 | 0.64 | 49.0 | 4.41e-01 | 100.0% | 60.0% |
| 4321251 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.64 | 50.0 | 4.20e-01 | 100.0% | 49.4% |
| 4258153 | 101.1.1.43 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Mor | 0.64 | 51.0 | 4.70e-01 | 100.0% | 69.1% |
| 3986748 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.63 | 50.0 | 3.99e-01 | 100.0% | 41.1% |
| 4031672 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.63 | 52.0 | 4.23e-01 | 100.0% | 47.5% |
| 4270741 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 49.0 | 4.95e-01 | 100.0% | 95.0% |
| 3589664 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.63 | 51.0 | 4.12e-01 | 100.0% | 44.7% |
| 4032183 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.63 | 51.0 | 4.23e-01 | 100.0% | 53.8% |
| 3698701 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 4.34e-01 | 100.0% | 63.1% |
| 3598408 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 46.0 | 4.07e-01 | 100.0% | 54.7% |
| 3981547 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.63 | 50.0 | 3.89e-01 | 100.0% | 38.9% |
| 3407600 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 46.0 | 4.28e-01 | 100.0% | 61.7% |
| 2556 | 101.1.1.43 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Mor | 0.61 | 48.0 | 4.66e-01 | 100.0% | 83.3% |
| 3590898 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.61 | 47.0 | 3.33e-01 | 97.4% | 34.7% |
| 4985590 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.61 | 48.0 | 4.77e-01 | 100.0% | 92.5% |
| 4412897 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 47.0 | 4.63e-01 | 100.0% | 86.7% |
| 3248146 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 48.0 | 4.27e-01 | 94.7% | 68.3% |
| 3970951 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 45.0 | 4.35e-01 | 100.0% | 74.0% |
| 3958460 | 6113.1.1.1 ↗ | alpha duplicates or obligate multimers › Dimerization element domain in modular polyketide synthases › Dimerization element domain in modular polyketide synthases › Dimerization element domain in modular polyketide synthases › PKS_DE | 0.59 | 44.0 | 3.90e-01 | 84.2% | 65.5% |
| 4023352 | 301.6.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › Tubulin_C | 0.59 | 45.0 | 3.03e-01 | 97.4% | 19.0% |
| 4020328 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.59 | 47.0 | 4.51e-01 | 92.1% | 84.4% |
| 4350608 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 44.0 | 4.38e-01 | 100.0% | 91.1% |
| 4984738 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 45.0 | 4.37e-01 | 97.4% | 95.6% |
| 3486395 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 48.0 | 3.77e-01 | 97.4% | 65.6% |
| 3289143 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.57 | 44.0 | 3.63e-01 | 97.4% | 49.4% |
| 5023725 | 3352.1.1.8 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PTPS_related | 0.57 | 43.0 | 2.58e-01 | 100.0% | 38.3% |
| 3895373 | 101.1.1.226 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0240 | 0.56 | 45.0 | 4.23e-01 | 94.7% | 84.0% |
| 3241745 | 192.29.1.172 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF29678 | 0.55 | 49.0 | 3.25e-01 | 100.0% | 69.7% |
| 4977346 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 42.0 | 4.07e-01 | 100.0% | 80.0% |
D3
medium
residues 161-226