Back to structures

IMGVR_UViG_3300006894_000039-3300006894-Ga0079215_1000005615

Arc-Vir

IMGVR_UViG_3300006894_000039-3300006894-Ga0079215_1000005615

Quality

67.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-107
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wesA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 39.0 2.34e-01 100.0% 8.9%
2od0A00 3.30.1460.30 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone 0.55 40.0 3.72e-01 80.5% 77.7%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4000752 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.65 37.0 2.52e-01 100.0% 16.5%
5028299 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.59 46.0 3.69e-01 85.7% 98.1%
4363301 3374.1.1.3 a+b complex topology › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › SpoIID 0.55 39.0 2.72e-01 76.6% 22.2%
3564962 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.52 28.0 3.05e-01 75.3% 58.5%
4957048 2498.2.1.0 mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain 0.51 38.0 3.09e-01 85.7% 42.1%
3583042 79.1.1.18 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 0.51 33.0 2.79e-01 89.6% 36.4%