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IMGVR_UViG_3300006918_000061-3300006918-Ga0079216_100050005

Arc-Vir

IMGVR_UViG_3300006918_000061-3300006918-Ga0079216_100050005

Identity

Kingdom:
archaea

Quality

77.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-40
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vx7000 2.30.170.20 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 0.71 59.0 5.03e-01 100.0% 66.1%
1vq8U00 2.30.170.20 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 0.66 52.0 4.70e-01 97.1% 75.5%
2od1A00 6.10.140.2220 Special › Helix non-globular › Helix Hairpins › 0.61 51.0 4.67e-01 100.0% 70.0%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954542 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.82 67.0 6.72e-01 100.0% 91.4%
5004198 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.80 63.0 6.36e-01 88.6% 88.6%
5004690 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.79 62.0 6.25e-01 88.6% 88.6%
3855126 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.77 67.0 6.75e-01 100.0% 97.1%
3907983 377.9.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like 0.77 70.0 6.38e-01 100.0% 93.3%
3919489 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.74 65.0 6.25e-01 100.0% 97.5%
5011221 377.1.1.126 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH 0.74 66.0 6.29e-01 100.0% 97.5%
4314985 377.1.1.15 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YacG 0.73 61.0 5.81e-01 100.0% 79.1%
3479234 377.9.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like 0.73 63.0 4.14e-01 97.1% 24.3%
3471959 109.4.1.72 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.72 62.0 3.49e-01 97.1% 8.8%
4943801 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.72 66.0 6.26e-01 100.0% 97.5%
3394526 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.72 65.0 5.95e-01 100.0% 95.6%
5030292 931.1.1.0 ↗ few secondary structure elements › Metallothionein › Metallothionein › Metallothionein 0.71 60.0 6.06e-01 100.0% 100.0%
5024734 375.1.1.323 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Arc_trans_TRASH 0.70 61.0 5.87e-01 97.1% 95.0%
3418010 377.9.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND 0.70 60.0 5.73e-01 94.3% 85.0%
3800970 377.9.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like 0.70 57.0 5.55e-01 100.0% 82.5%
3921605 377.9.1.9 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 0.69 57.0 3.99e-01 100.0% 28.7%
3405764 377.9.1.9 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 0.68 56.0 5.42e-01 100.0% 82.5%
8219 377.9.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND 0.67 57.0 5.25e-01 100.0% 74.5%
3471258 906.2.1.0 ↗ few secondary structure elements › CCCH zinc finger › SSP1 C3H-type zinc finger › SSP1 C3H-type zinc finger 0.64 52.0 5.05e-01 91.4% 80.0%
3592231 377.9.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like 0.63 52.0 5.09e-01 100.0% 87.5%
3935895 377.9.1.2 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT 0.62 50.0 4.90e-01 100.0% 85.0%
3813038 377.9.1.2 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT 0.62 50.0 4.90e-01 97.1% 85.0%
3781281 377.9.1.4 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-Mss51 0.60 49.0 3.91e-01 97.1% 46.7%
5024136 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.57 43.0 2.97e-01 94.3% 22.2%
3851875 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.53 40.0 3.82e-01 100.0% 70.0%
3601411 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.52 42.0 3.91e-01 97.1% 93.8%
3330188 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.50 38.0 3.30e-01 94.3% 63.1%