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IMGVR_UViG_3300007072_000039-3300007072-Ga0073932_100272715
Arc-VirIMGVR_UViG_3300007072_000039-3300007072-Ga0073932_100272715
Identity
- Kingdom:
- archaea
Quality
77.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-99
Domain cluster:
rep: IMGVR_UViG_3300005099_000205-3300005099-Ga0072682_10918728__D21-82
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b6dB00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.88 | 61.0 | 5.82e-01 | 100.0% | 63.2% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.72 | 60.0 | 4.87e-01 | 100.0% | 49.0% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.70 | 54.0 | 4.36e-01 | 85.7% | 44.3% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.67 | 48.0 | 3.98e-01 | 100.0% | 41.6% |
| 1qlbA04 | 3.10.20.820 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.62 | 37.0 | 2.99e-01 | 91.8% | 29.8% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 50.0 | 4.04e-01 | 100.0% | 85.7% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 46.0 | 3.35e-01 | 87.8% | 52.9% |
| 3e9eB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.60 | 48.0 | 3.21e-01 | 100.0% | 95.8% |
| 5mmjj00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 40.0 | 3.29e-01 | 73.5% | 60.6% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 43.0 | 4.14e-01 | 100.0% | 70.2% |
| 4fmrA02 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.58 | 39.0 | 3.31e-01 | 100.0% | 39.8% |
| 1go3E01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 48.0 | 3.97e-01 | 100.0% | 87.2% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.56 | 36.0 | 3.03e-01 | 100.0% | 37.9% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 41.0 | 3.81e-01 | 100.0% | 63.1% |
| 2c35B02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 44.0 | 3.80e-01 | 100.0% | 91.2% |
| 3tssA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 44.0 | 4.02e-01 | 98.0% | 98.6% |
| 4lxjA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 42.0 | 2.52e-01 | 91.8% | 21.4% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 43.0 | 3.31e-01 | 100.0% | 64.7% |
| 3p5jB01 | 2.20.25.530 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 39.0 | 3.45e-01 | 81.6% | 89.2% |
| 7usrA01 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.27e-01 | 100.0% | 57.2% |
| 2jr1A01 | 3.30.160.510 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Histone-like nucleoid-structuring protein H-NS | 0.52 | 37.0 | 3.44e-01 | 100.0% | 59.4% |
| 3goxA03 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.52 | 37.0 | 3.29e-01 | 89.8% | 49.4% |
| 4yfbC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.52 | 38.0 | 3.39e-01 | 87.8% | 52.6% |
| 3kioC01 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 43.0 | 3.59e-01 | 100.0% | 51.6% |
| 4pqxA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.51 | 44.0 | 3.91e-01 | 100.0% | 95.9% |
| 2kssA01 | 2.30.30.630 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 41.0 | 3.85e-01 | 98.0% | 74.6% |
| 1ya5T01 | 2.20.160.10 | Mainly Beta › Single Sheet › titin filament fold › titin domain like | 0.50 | 39.0 | 3.36e-01 | 95.9% | 52.4% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929230 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.95 | 67.0 | 7.43e-01 | 100.0% | 90.0% |
| 3923898 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.95 | 64.0 | 5.25e-01 | 100.0% | 42.5% |
| 5069246 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.92 | 60.0 | 5.97e-01 | 95.9% | 66.0% |
| 3804854 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.91 | 64.0 | 4.70e-01 | 100.0% | 31.3% |
| 3459484 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.91 | 64.0 | 6.11e-01 | 100.0% | 65.5% |
| 3487738 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.89 | 63.0 | 6.27e-01 | 100.0% | 72.0% |
| 3394414 | 376.1.2.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM+PET | 0.89 | 66.0 | 4.50e-01 | 100.0% | 25.7% |
| 4285739 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.89 | 65.0 | 5.61e-01 | 100.0% | 52.1% |
| 3933161 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.87 | 61.0 | 5.90e-01 | 100.0% | 65.5% |
| 3597664 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.86 | 60.0 | 6.30e-01 | 100.0% | 80.0% |
| 3513068 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.85 | 59.0 | 5.34e-01 | 100.0% | 55.4% |
| 3990333 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.84 | 59.0 | 5.05e-01 | 100.0% | 48.0% |
| 4965857 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.82 | 73.0 | 6.46e-01 | 100.0% | 75.4% |
| 5034811 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.81 | 68.0 | 6.32e-01 | 100.0% | 73.3% |
| 3271441 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.81 | 60.0 | 5.81e-01 | 100.0% | 70.9% |
| 4936660 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.81 | 68.0 | 6.53e-01 | 100.0% | 80.0% |
| 4654276 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.81 | 67.0 | 5.19e-01 | 100.0% | 42.9% |
| 3700246 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.79 | 67.0 | 5.01e-01 | 100.0% | 40.0% |
| 3395156 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.78 | 69.0 | 5.15e-01 | 100.0% | 41.7% |
| 4965846 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.77 | 57.0 | 5.95e-01 | 83.7% | 86.7% |
| 4028826 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.76 | 64.0 | 4.77e-01 | 100.0% | 38.3% |
| 3685866 | 2.1.1.81 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 | 0.66 | 54.0 | 4.34e-01 | 100.0% | 90.9% |
| 3657469 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.65 | 43.0 | 3.48e-01 | 98.0% | 33.0% |
| 3428777 | 812.1.1.0 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain | 0.65 | 44.0 | 4.42e-01 | 91.8% | 70.0% |
| 4991697 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 50.0 | 4.00e-01 | 100.0% | 78.1% |
| 5000768 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.61 | 48.0 | 3.91e-01 | 100.0% | 79.1% |
| 3178425 | 221.1.1.179 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ams2-SPT21_N | 0.61 | 55.0 | 3.91e-01 | 100.0% | 40.6% |
| 3961827 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.60 | 52.0 | 4.11e-01 | 100.0% | 81.7% |
| 3235864 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 52.0 | 4.59e-01 | 100.0% | 94.7% |
| 3641061 | 5.3.1.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin | 0.59 | 38.0 | 2.71e-01 | 100.0% | 20.3% |
| 4669194 | 377.4.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › RRG8 | 0.59 | 49.0 | 3.28e-01 | 91.8% | 30.6% |
| 3799844 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.58 | 45.0 | 3.06e-01 | 100.0% | 22.1% |
| 3702518 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 43.0 | 3.64e-01 | 100.0% | 97.3% |
| 3887275 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.55 | 40.0 | 2.52e-01 | 85.7% | 13.3% |
| 3931418 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 40.0 | 3.83e-01 | 100.0% | 68.3% |
| 4994787 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.54 | 43.0 | 3.50e-01 | 100.0% | 83.5% |
| 3614906 | 4.26.1.8 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2 | 0.54 | 42.0 | 3.90e-01 | 98.0% | 67.1% |
| 3769918 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 44.0 | 3.51e-01 | 100.0% | 77.3% |
| 3442276 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 43.0 | 3.39e-01 | 100.0% | 96.7% |
| 5031423 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.52 | 35.0 | 2.67e-01 | 81.6% | 25.9% |
| 3375457 | 4.1.1.159 ↗ | beta barrels › SH3 › SH3 › SH3 › Saf4_Yju2 | 0.51 | 40.0 | 3.71e-01 | 100.0% | 65.3% |
| 3611540 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 41.0 | 2.46e-01 | 95.9% | 88.0% |
| 3621920 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.50 | 34.0 | 2.58e-01 | 71.4% | 99.2% |