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IMGVR_UViG_3300007161_000008-3300007161-Ga0099839_1021002

Arc-Vir

IMGVR_UViG_3300007161_000008-3300007161-Ga0099839_1021002

Quality

91.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 251-453
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF06508.20 best QueC 181.5 2.20e-53 100.0% 94.8%
PF02568.21 ThiI 25.0 1.80e-05 94.1% 59.4%
PF03054.23 tRNA_Me_trans 23.3 6.20e-05 91.1% 61.9%
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pg3A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.82 76.0 7.34e-01 100.0% 87.7%
2c5sA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.80 63.0 6.31e-01 94.1% 80.3%
1xngA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.77 64.0 5.91e-01 100.0% 70.0%
1vbkA03 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.76 48.0 5.80e-01 89.7% 95.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.76 63.0 5.71e-01 100.0% 67.6%
1k92A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.76 55.0 6.10e-01 100.0% 93.1%
3vrhA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.73 63.0 5.44e-01 100.0% 60.7%
3k32B00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.72 63.0 6.48e-01 100.0% 94.4%
2wteA01 3.40.50.11700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 42.0 4.98e-01 84.7% 92.0%
3nbkD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 49.0 5.45e-01 96.6% 94.5%
2derB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 59.0 5.92e-01 94.1% 93.1%
1q15D02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 57.0 5.18e-01 92.1% 75.0%
2wq7A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 42.0 4.99e-01 84.2% 96.4%
4bjhB01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.64 34.0 3.88e-01 88.2% 68.0%
6xl1A01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.64 47.0 5.29e-01 95.6% 98.7%
1m1zA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 55.0 4.89e-01 92.6% 72.6%
3o26A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 50.0 4.44e-01 87.7% 92.9%
4g1vA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.60 36.0 4.27e-01 82.3% 87.5%
6pznB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 49.0 4.62e-01 88.7% 89.2%
4dyvA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 49.0 4.82e-01 87.7% 89.7%
1e7wB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 48.0 4.49e-01 88.7% 88.4%
2rhcA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 48.0 4.49e-01 88.7% 88.7%
7va8A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 49.0 4.48e-01 89.2% 92.0%
2d4aD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 39.0 4.64e-01 81.3% 100.0%
3u49D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 48.0 4.54e-01 88.7% 88.0%
1qydA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 43.0 4.45e-01 87.2% 82.7%
3ew7A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 41.0 4.48e-01 87.7% 88.9%
3l6eA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 47.0 4.70e-01 87.7% 88.1%
7zllA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 48.0 4.36e-01 91.1% 98.2%
1iq0A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 47.0 3.84e-01 88.7% 91.1%
5idqB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 46.0 4.58e-01 87.2% 85.2%
8g7wA04 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 46.0 4.41e-01 87.7% 86.1%
2wtbA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 38.0 4.05e-01 87.7% 78.9%
7zvjA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 46.0 4.34e-01 88.7% 100.0%
8jatA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 45.0 4.61e-01 87.2% 93.9%
4q6bA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 34.0 4.05e-01 82.8% 92.5%
3eafA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 45.0 4.80e-01 92.6% 99.4%
3tztA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.54 46.0 4.45e-01 90.1% 99.6%
2cb0A02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.54 33.0 3.78e-01 95.6% 80.9%
6dv2G02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 38.0 3.99e-01 87.7% 79.3%
5u4qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 4.13e-01 95.6% 99.0%
3b1fA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 41.0 4.39e-01 88.2% 92.6%
3c4aA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 37.0 3.67e-01 87.7% 66.7%
3otgA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 44.0 4.28e-01 88.2% 93.3%
3lkbA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 41.0 4.50e-01 92.6% 99.4%
3kkjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 36.0 4.05e-01 88.2% 90.8%
1vquB02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.52 45.0 4.11e-01 91.1% 73.0%
3uykA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 44.0 4.47e-01 88.2% 93.9%
2rbcA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 43.0 3.80e-01 88.7% 94.4%
7yosA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.52 41.0 4.24e-01 95.6% 88.0%
3h2sA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 43.0 4.25e-01 88.7% 89.3%
7bmfA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.51 40.0 4.20e-01 95.6% 89.7%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 34.0 3.88e-01 88.2% 91.9%
5l3qA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 42.0 4.23e-01 88.7% 87.4%
3qj4A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 36.0 4.02e-01 87.2% 94.3%
2ivdB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 37.0 4.06e-01 86.7% 93.3%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.99 97.0 9.38e-01 100.0% 91.8%
4991573 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.97 95.0 9.07e-01 100.0% 89.3%
4127143 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.96 91.0 8.50e-01 100.0% 82.8%
None 0.96 91.0 8.50e-01 100.0% 82.8%
None 0.95 91.0 8.86e-01 100.0% 91.6%
4338016 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.95 90.0 8.59e-01 100.0% 86.5%
None 0.94 92.0 8.78e-01 100.0% 89.8%
None 0.94 92.0 8.80e-01 100.0% 90.2%
4443198 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.94 92.0 8.67e-01 100.0% 91.5%
None 0.94 89.0 8.67e-01 100.0% 91.2%
None 0.94 92.0 8.72e-01 100.0% 90.9%
4192836 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.94 92.0 8.63e-01 100.0% 91.1%
4098108 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.94 92.0 8.79e-01 100.0% 90.7%
None 0.94 90.0 8.44e-01 100.0% 84.1%
None 0.93 90.0 8.76e-01 99.5% 91.4%
None 0.93 91.0 8.73e-01 100.0% 90.2%
4538553 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.93 91.0 8.86e-01 100.0% 94.0%
4125125 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.93 90.0 8.93e-01 100.0% 96.2%
None 0.93 90.0 8.82e-01 100.0% 94.0%
4241012 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.93 90.0 8.64e-01 100.0% 90.2%
None 0.92 90.0 8.45e-01 100.0% 92.8%
None 0.92 90.0 8.59e-01 100.0% 90.2%
4075676 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.92 89.0 8.13e-01 100.0% 84.3%
4037820 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.92 85.0 8.34e-01 100.0% 90.2%
None 0.91 89.0 8.16e-01 100.0% 88.8%
3281499 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.91 84.0 8.16e-01 100.0% 87.3%
None 0.91 88.0 8.35e-01 100.0% 87.8%
4172759 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.90 78.0 8.01e-01 100.0% 92.3%
None 0.90 88.0 8.41e-01 100.0% 92.0%
4930592 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.90 88.0 8.50e-01 100.0% 92.3%
4308342 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.90 85.0 8.39e-01 100.0% 93.3%
None 0.89 84.0 8.34e-01 100.0% 94.3%
None 0.89 86.0 8.13e-01 100.0% 87.4%
4601377 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.89 86.0 8.27e-01 100.0% 89.8%
None 0.89 84.0 8.18e-01 100.0% 91.3%
4929749 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.88 83.0 8.09e-01 100.0% 90.7%
5039281 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.88 81.0 8.15e-01 100.0% 94.1%
4127669 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.88 85.0 7.98e-01 100.0% 90.4%
4680017 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.87 85.0 7.91e-01 100.0% 90.0%
4976396 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.85 82.0 7.53e-01 100.0% 88.8%
5041133 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.84 66.0 6.38e-01 94.1% 73.2%
4995736 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.84 69.0 6.93e-01 100.0% 83.4%
4969595 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.82 50.0 6.27e-01 90.6% 95.4%
4931977 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.82 65.0 6.35e-01 94.1% 75.0%
5034136 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.82 78.0 6.57e-01 100.0% 63.8%
5001159 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.81 65.0 6.44e-01 94.1% 79.5%
4955052 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.81 78.0 6.40e-01 100.0% 63.8%
4996081 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.80 77.0 6.36e-01 100.0% 62.1%
5035048 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.80 64.0 6.41e-01 94.1% 81.0%
5056873 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.80 77.0 5.95e-01 100.0% 51.5%
4947792 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.80 65.0 6.39e-01 94.1% 79.3%
4661318 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.79 63.0 6.11e-01 94.1% 75.0%
4998101 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.79 65.0 6.33e-01 94.1% 78.2%
4933306 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.79 62.0 6.19e-01 94.1% 78.1%
5056286 2005.1.1.8 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth 0.78 62.0 6.65e-01 99.5% 92.2%
5022266 2005.1.1.14 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.76 64.0 6.64e-01 100.0% 92.1%
None 0.75 63.0 6.04e-01 100.0% 77.0%
None 0.74 63.0 6.05e-01 100.0% 77.4%
None 0.74 63.0 5.69e-01 100.0% 68.1%
3604378 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.74 64.0 5.80e-01 100.0% 69.1%
5022630 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.74 63.0 5.61e-01 100.0% 65.3%
3838008 2005.1.1.23 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.74 67.0 6.17e-01 94.1% 87.2%
4395650 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.74 62.0 5.76e-01 100.0% 72.4%
5054895 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.73 64.0 6.07e-01 100.0% 78.3%
None 0.73 62.0 6.25e-01 99.0% 88.5%
4450533 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.73 64.0 5.56e-01 98.5% 63.1%
None 0.73 64.0 5.96e-01 100.0% 75.5%
5053982 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.72 64.0 5.73e-01 98.5% 69.3%
5036187 2005.1.1.8 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth 0.72 63.0 6.45e-01 100.0% 94.9%
4943110 2005.1.1.111 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › GMP_synt_C 0.71 59.0 5.98e-01 99.0% 87.5%
4163031 2005.1.1.14 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct 0.71 58.0 5.58e-01 100.0% 76.4%
5063199 7592.1.1.6 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N 0.70 44.0 5.28e-01 85.7% 93.3%
4511920 2005.1.1.47 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans 0.70 63.0 6.36e-01 98.0% 93.2%
None 0.69 62.0 6.04e-01 93.6% 89.5%
None 0.69 61.0 6.19e-01 96.6% 93.5%
None 0.69 63.0 6.42e-01 98.0% 98.5%
5015379 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.69 63.0 5.72e-01 100.0% 74.2%
3603397 2005.1.1.70 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DUF7411 0.68 62.0 5.73e-01 100.0% 76.8%
4148115 2005.1.1.23 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.68 61.0 5.93e-01 93.6% 88.0%
5022267 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.67 62.0 5.76e-01 100.0% 78.4%
3895768 2005.1.1.23 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.67 62.0 5.84e-01 96.6% 92.1%
3603515 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.67 54.0 5.43e-01 100.0% 82.4%
5044033 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.67 59.0 5.23e-01 93.6% 75.8%
4955158 7592.1.1.1 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Cas_NE0113 0.66 47.0 4.93e-01 96.1% 78.9%
3166360 2005.1.1.47 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans 0.66 61.0 5.91e-01 98.0% 87.6%
3386240 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.66 62.0 5.56e-01 100.0% 75.6%
5080574 2005.1.1.108 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF30497 0.65 60.0 4.92e-01 98.0% 70.9%
4967200 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.63 56.0 4.93e-01 93.6% 78.9%
4927582 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.62 55.0 4.37e-01 93.1% 65.2%
5018426 2005.1.1.4 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.61 54.0 4.74e-01 93.6% 72.9%
4927456 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.58 48.0 4.63e-01 88.2% 87.7%
4591667 2003.1.1.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Ldh_1_N 0.57 39.0 4.58e-01 81.3% 99.3%
5044507 2003.1.1.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.54 48.0 4.23e-01 96.1% 99.3%
4994258 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.51 40.0 3.81e-01 96.1% 69.4%
4995335 2488.1.1.14 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › DUF2122 0.51 36.0 4.09e-01 87.7% 95.5%
5059458 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.50 40.0 3.77e-01 95.6% 67.8%
D2 medium residues 1-98_189-224
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6czfA01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.75 69.0 5.07e-01 97.8% 69.8%
1xffA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.73 67.0 5.42e-01 97.8% 86.6%
4zfjD00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.72 67.0 5.48e-01 97.8% 91.6%
1ao0A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.71 66.0 4.93e-01 97.8% 68.3%
1te5A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.63 58.0 4.59e-01 97.8% 93.7%
1s4dE02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.62 37.0 3.69e-01 73.1% 56.1%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 39.0 3.96e-01 90.3% 67.9%
7y8sB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 35.0 4.28e-01 78.4% 97.6%
2ekjA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 38.0 4.22e-01 82.1% 86.7%
1tdqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 37.0 4.25e-01 82.1% 93.6%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.57 40.0 4.31e-01 88.1% 84.6%
3l5iA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 34.0 4.09e-01 78.4% 93.2%
3ndcA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.56 39.0 4.04e-01 70.9% 84.6%
3fl7A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 35.0 4.14e-01 80.6% 97.7%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.54 43.0 4.57e-01 85.8% 97.4%
1o59A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 36.0 3.64e-01 90.3% 65.5%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 33.0 3.98e-01 84.3% 100.0%
6gszA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 4.29e-01 81.3% 98.0%
4bfeC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 4.40e-01 77.6% 98.1%
4wtxA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 4.20e-01 79.9% 97.9%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.53 32.0 3.69e-01 85.1% 84.0%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.53 39.0 4.09e-01 76.9% 90.8%
5h4eA01 2.60.110.10 Mainly Beta › Sandwich › Thaumatin › Thaumatin 0.53 41.0 3.44e-01 82.1% 93.9%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.53 35.0 3.91e-01 79.1% 85.8%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.52 41.0 4.36e-01 82.8% 100.0%
3bdeB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 35.0 3.97e-01 99.3% 92.9%
8ezmH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 4.21e-01 79.1% 100.0%
2xliA01 3.30.70.2540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 0.51 34.0 3.28e-01 99.3% 56.4%
3r4rA01 2.60.40.2580 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 36.0 3.51e-01 71.6% 96.6%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.51 40.0 4.14e-01 82.1% 97.6%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.51 39.0 4.01e-01 81.3% 93.9%
2pqqA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 36.0 3.50e-01 72.4% 72.8%
3ffjA04 2.60.40.4040 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 33.0 3.39e-01 70.9% 69.3%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.50 40.0 4.14e-01 83.6% 91.8%
4bq2D01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.50 42.0 3.73e-01 89.6% 83.1%
5z6pA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.50 42.0 3.81e-01 89.6% 82.0%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4991572 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.97 94.0 7.40e-01 98.5% 92.5%
3532427 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.80 75.0 5.87e-01 98.5% 92.3%
5077548 210.1.3.0 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.79 74.0 5.57e-01 98.5% 90.8%
None 0.79 75.0 5.88e-01 100.0% 92.7%
5066749 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.78 73.0 5.82e-01 99.3% 90.6%
5052100 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.77 73.0 5.77e-01 99.3% 89.6%
4321843 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.77 72.0 5.94e-01 98.5% 96.4%
3741900 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.77 72.0 5.63e-01 98.5% 87.3%
4971386 210.1.3.0 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.76 71.0 5.34e-01 98.5% 93.0%
5027645 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.76 72.0 5.64e-01 100.0% 90.8%
4954583 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.76 71.0 5.69e-01 97.8% 89.6%
5071630 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.75 71.0 5.73e-01 100.0% 90.4%
4588679 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.75 70.0 5.61e-01 98.5% 89.0%
4947599 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.75 71.0 5.68e-01 100.0% 89.0%
5032499 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.75 71.0 5.68e-01 100.0% 91.4%
4976025 210.1.3.0 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.75 70.0 5.59e-01 98.5% 85.7%
5033976 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.75 70.0 5.58e-01 97.8% 90.0%
4940798 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.75 70.0 5.58e-01 98.5% 85.3%
4994995 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.75 69.0 5.61e-01 97.8% 90.2%
3973007 210.1.3.0 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.74 69.0 5.51e-01 98.5% 89.2%
3942872 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.74 70.0 5.47e-01 98.5% 94.1%
4484517 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.74 70.0 5.58e-01 100.0% 85.2%
3965213 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.74 69.0 5.33e-01 98.5% 86.9%
None 0.74 69.0 5.61e-01 98.5% 89.8%
5081419 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.74 69.0 5.32e-01 98.5% 93.3%
5024709 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.74 68.0 5.59e-01 97.0% 92.0%
4976794 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.74 69.0 5.61e-01 98.5% 90.0%
4259223 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.74 69.0 5.57e-01 98.5% 88.1%
3963821 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.73 69.0 5.44e-01 98.5% 83.6%
5013417 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.73 69.0 5.61e-01 100.0% 90.2%
None 0.73 68.0 5.50e-01 98.5% 86.7%
5027271 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.73 67.0 5.36e-01 97.8% 94.4%
4149445 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.73 68.0 5.44e-01 98.5% 84.5%
4981026 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.73 69.0 5.54e-01 100.0% 88.7%
3782814 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.73 68.0 5.11e-01 98.5% 92.9%
None 0.73 68.0 5.44e-01 98.5% 89.2%
4680317 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.72 68.0 5.47e-01 98.5% 88.1%
5054721 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.72 68.0 5.50e-01 100.0% 90.8%
4960069 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.72 68.0 5.51e-01 98.5% 92.2%
None 0.72 67.0 5.34e-01 97.8% 89.4%
4541620 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.72 67.0 5.26e-01 98.5% 85.5%
4147605 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.72 67.0 5.30e-01 98.5% 84.8%
None 0.71 66.0 5.38e-01 98.5% 87.7%
5001463 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.71 65.0 4.97e-01 98.5% 93.2%
4271892 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.70 48.0 5.02e-01 70.1% 93.6%
5011866 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.70 65.0 5.31e-01 98.5% 97.4%
5046400 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.69 65.0 5.03e-01 98.5% 94.0%
4281749 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.69 48.0 5.05e-01 70.9% 93.3%
4327532 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.67 40.0 4.22e-01 72.4% 65.8%
3953557 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.65 60.0 4.75e-01 98.5% 93.1%
4083103 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.65 46.0 4.72e-01 71.6% 89.6%
4929079 821.1.1.15 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 0.63 36.0 4.18e-01 72.4% 78.7%
4606373 304.6.1.3 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE 0.58 38.0 3.07e-01 100.0% 33.0%
3241410 10.32.1.218 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 0.58 39.0 4.26e-01 90.3% 84.5%
3666940 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.57 33.0 3.49e-01 73.1% 61.7%
3365225 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.56 34.0 3.54e-01 73.1% 65.0%
5042583 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.56 39.0 4.45e-01 71.6% 100.0%
4150009 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.56 49.0 4.89e-01 96.3% 97.1%
4306604 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.55 37.0 4.11e-01 89.6% 86.7%
4099164 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.55 46.0 4.69e-01 91.0% 97.8%
3251253 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 39.0 3.41e-01 73.1% 96.0%
5083886 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 43.0 4.06e-01 88.1% 88.7%
3180053 304.6.1.3 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE 0.53 32.0 2.63e-01 100.0% 31.4%
3953369 304.4.1.2 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase 0.51 33.0 3.55e-01 85.8% 78.0%
3596308 11.1.4.80 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › C2_ITFG1 0.50 38.0 3.81e-01 81.3% 99.3%
D3 medium residues 99-188_225-245
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13537.12 best GATase_7 42.3 1.00e-10 93.7% 69.1%
PF13522.12 GATase_6 28.9 1.50e-06 91.0% 60.8%