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IMGVR_UViG_3300007210_000237-3300007210-Ga0103359_1050345
Arc-VirIMGVR_UViG_3300007210_000237-3300007210-Ga0103359_1050345
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-137
Domain cluster:
rep: JN051154.1__AER59760.1__clP1_001__00001__D30-123
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5xamA02 | 3.30.70.3220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 43.0 | 3.71e-01 | 91.7% | 39.1% |
| 4ixjA01 | 3.30.1300.80 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.64 | 33.0 | 3.86e-01 | 82.4% | 70.1% |
| 3gwmA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.59 | 40.0 | 3.84e-01 | 95.4% | 58.9% |
| 4nleA02 | 1.10.275.60 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › | 0.57 | 42.0 | 3.96e-01 | 87.0% | 63.6% |
| 2xguB00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.57 | 38.0 | 3.63e-01 | 97.2% | 56.0% |
| 2yqrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 44.0 | 4.52e-01 | 96.3% | 89.3% |
| 1fc4A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 33.0 | 3.13e-01 | 77.8% | 47.8% |
| 5xukA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.53 | 35.0 | 3.47e-01 | 95.4% | 62.6% |
| 4jn3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.53 | 43.0 | 3.49e-01 | 88.9% | 67.0% |
| 3plwA00 | 3.30.40.190 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.51 | 41.0 | 4.09e-01 | 87.0% | 97.3% |
| 5af7B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 42.0 | 3.81e-01 | 90.7% | 85.8% |
| 3ei3A04 | 1.10.150.910 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.50 | 32.0 | 3.59e-01 | 84.3% | 81.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3912886 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.56 | 44.0 | 3.80e-01 | 86.1% | 90.3% |
| 3591474 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.52 | 41.0 | 3.26e-01 | 84.3% | 88.2% |
| 3463214 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 40.0 | 2.86e-01 | 82.4% | 45.3% |
| 3825533 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 37.0 | 3.51e-01 | 76.9% | 96.2% |