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IMGVR_UViG_3300007222_000005-3300007222-Ga0104061_10055237
Arc-VirIMGVR_UViG_3300007222_000005-3300007222-Ga0104061_10055237
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-160
Domain cluster:
rep: MF939898.1__ATE84845.1__vBOeSunk162_17__00017__D7-128
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 52.0 | 5.59e-01 | 80.0% | 96.4% |
| 3so5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 33.0 | 4.03e-01 | 80.0% | 75.2% |
| 3fbqA01 | 2.60.40.1630 | Mainly Beta › Sandwich › Immunoglobulin-like › bacillus anthracis domain | 0.63 | 33.0 | 3.46e-01 | 77.5% | 54.2% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.62 | 33.0 | 4.01e-01 | 80.0% | 77.7% |
| 3vwaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 30.0 | 3.86e-01 | 72.5% | 81.1% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.61 | 32.0 | 3.76e-01 | 78.8% | 73.6% |
| 2vz6B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 29.0 | 3.94e-01 | 71.2% | 89.2% |
| 1k8kD01 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 33.0 | 3.45e-01 | 76.9% | 57.0% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.60 | 44.0 | 4.50e-01 | 75.6% | 89.1% |
| 4r6uA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 29.0 | 3.57e-01 | 80.0% | 70.9% |
| 1s9iB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 29.0 | 3.62e-01 | 72.5% | 77.4% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 35.0 | 3.71e-01 | 73.1% | 64.6% |
| 6efyA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 29.0 | 3.54e-01 | 80.0% | 73.5% |
| 3l4jA04 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 30.0 | 3.66e-01 | 76.9% | 77.5% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 28.0 | 3.11e-01 | 74.4% | 55.5% |
| 4gafB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 32.0 | 3.72e-01 | 80.0% | 76.4% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 26.0 | 3.33e-01 | 76.9% | 71.1% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 27.0 | 3.09e-01 | 76.2% | 60.5% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.54 | 39.0 | 3.34e-01 | 75.0% | 60.0% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.53 | 38.0 | 4.04e-01 | 81.9% | 83.7% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 30.0 | 3.80e-01 | 78.8% | 96.7% |
| 1p97A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 32.0 | 3.71e-01 | 78.8% | 85.1% |
| 4jb9H01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 31.0 | 3.44e-01 | 78.8% | 72.5% |
| 3uiuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 30.0 | 3.73e-01 | 73.8% | 96.9% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.50 | 27.0 | 2.87e-01 | 70.6% | 56.4% |
| 3rkxA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 37.0 | 3.43e-01 | 76.2% | 74.0% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3603127 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 44.0 | 5.84e-01 | 71.2% | 100.0% |
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.75 | 54.0 | 5.90e-01 | 73.8% | 93.3% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.74 | 50.0 | 5.85e-01 | 70.0% | 98.2% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.73 | 48.0 | 5.80e-01 | 70.0% | 100.0% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.72 | 51.0 | 5.89e-01 | 73.1% | 100.0% |
| 4988102 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.71 | 48.0 | 5.78e-01 | 73.1% | 100.0% |
| 4032562 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.71 | 51.0 | 5.58e-01 | 73.8% | 100.0% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.70 | 51.0 | 5.06e-01 | 74.4% | 81.7% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.68 | 49.0 | 5.11e-01 | 73.8% | 90.6% |
| 2471641 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.68 | 49.0 | 5.05e-01 | 73.8% | 85.9% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.67 | 48.0 | 4.95e-01 | 73.8% | 92.2% |
| 4196274 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.63 | 35.0 | 4.03e-01 | 76.2% | 73.0% |
| 3928715 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 33.0 | 3.90e-01 | 79.4% | 75.7% |
| 4034134 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.60 | 40.0 | 4.44e-01 | 77.5% | 85.6% |
| 184718 | 1.1.13.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_12 | 0.60 | 44.0 | 4.50e-01 | 75.6% | 89.1% |
| 4028502 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.57 | 33.0 | 3.68e-01 | 78.1% | 72.5% |
| 4319533 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.57 | 32.0 | 3.47e-01 | 78.8% | 62.1% |
| 4349207 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 35.0 | 3.68e-01 | 75.0% | 66.4% |
| 3474795 | 223.2.1.34 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 | 0.53 | 29.0 | 2.74e-01 | 80.6% | 42.6% |
| 140398 | 304.124.1.4 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF4128 | 0.53 | 38.0 | 4.04e-01 | 81.9% | 83.7% |
| 3625374 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 31.0 | 3.54e-01 | 78.8% | 75.8% |
| 2462280 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.53 | 37.0 | 3.54e-01 | 70.6% | 86.8% |
| 3711910 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 28.0 | 2.82e-01 | 78.1% | 50.0% |
| 3626119 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.50 | 32.0 | 3.28e-01 | 80.0% | 63.9% |