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IMGVR_UViG_3300007354_000050-3300007354-Ga0104761_10051001
Arc-VirIMGVR_UViG_3300007354_000050-3300007354-Ga0104761_10051001
Identity
- Kingdom:
- archaea
Quality
75.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-33
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uwvA03 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 48.0 | 3.21e-01 | 75.8% | 27.0% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.62 | 42.0 | 3.35e-01 | 72.7% | 30.5% |
| 1nqlB00 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.61 | 43.0 | 3.97e-01 | 72.7% | 70.8% |
| 2yfsA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 45.0 | 2.55e-01 | 90.9% | 7.0% |
| 1pvgA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.59 | 41.0 | 2.56e-01 | 84.8% | 36.1% |
| 3t5tB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 42.0 | 2.51e-01 | 81.8% | 9.1% |
| 6nrzA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 41.0 | 2.44e-01 | 87.9% | 18.9% |
| 3g2bA00 | 1.10.10.1150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) | 0.58 | 41.0 | 3.29e-01 | 90.9% | 56.7% |
| 3weeB03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.57 | 42.0 | 3.03e-01 | 72.7% | 33.0% |
| 6aqgD02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 40.0 | 2.39e-01 | 87.9% | 19.6% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.55 | 41.0 | 2.72e-01 | 93.9% | 30.3% |
| 2mnjB00 | 2.60.40.4160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 38.0 | 3.06e-01 | 81.8% | 85.2% |
| 7uqyB01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 36.0 | 2.30e-01 | 78.8% | 51.9% |
| 3aa0B01 | 1.20.58.570 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain | 0.51 | 35.0 | 2.78e-01 | 72.7% | 59.1% |
| 3e0jA01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.51 | 37.0 | 2.28e-01 | 78.8% | 76.6% |
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.50 | 36.0 | 2.72e-01 | 75.8% | 25.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5044501 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.70 | 49.0 | 3.42e-01 | 72.7% | 21.8% |
| 2774534 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.67 | 47.0 | 2.88e-01 | 72.7% | 10.9% |
| 3380640 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 47.0 | 2.84e-01 | 72.7% | 9.6% |
| 3803894 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.64 | 44.0 | 3.50e-01 | 72.7% | 34.7% |
| 3816749 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.63 | 46.0 | 2.69e-01 | 78.8% | 18.8% |
| 3624521 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.63 | 44.0 | 3.35e-01 | 72.7% | 31.8% |
| 3993494 | 5.1.5.42 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RMC1_N | 0.62 | 44.0 | 2.63e-01 | 75.8% | 27.7% |
| 3477236 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.62 | 44.0 | 2.35e-01 | 81.8% | 5.0% |
| 4960051 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.61 | 43.0 | 2.80e-01 | 72.7% | 13.8% |
| 3575490 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 42.0 | 4.03e-01 | 78.8% | 100.0% |
| 2141918 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.60 | 43.0 | 2.71e-01 | 75.8% | 34.9% |
| 1170456 | 63.1.1.1 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › CIMR | 0.60 | 43.0 | 3.19e-01 | 81.8% | 27.0% |
| 4025343 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 41.0 | 2.42e-01 | 84.8% | 7.5% |
| 3415649 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 47.0 | 2.93e-01 | 78.8% | 14.7% |
| 2389835 | 312.1.1.1 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_transf | 0.59 | 44.0 | 2.86e-01 | 81.8% | 15.6% |
| 3407467 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.58 | 40.0 | 2.70e-01 | 84.8% | 16.5% |
| 3060306 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.57 | 40.0 | 2.94e-01 | 75.8% | 35.2% |
| 1548765 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.56 | 40.0 | 2.95e-01 | 75.8% | 37.3% |
| 3703085 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 38.0 | 2.22e-01 | 78.8% | 44.9% |
| 3407798 | 3246.1.1.0 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins | 0.50 | 34.0 | 2.54e-01 | 81.8% | 84.0% |