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IMGVR_UViG_3300007811_000009-3300007811-Ga0105111_10000907
Arc-VirIMGVR_UViG_3300007811_000009-3300007811-Ga0105111_10000907
Identity
- Kingdom:
- archaea
Quality
74.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-65
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g25A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 47.0 | 4.71e-01 | 74.6% | 93.8% |
| 1iyjB03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 40.0 | 3.06e-01 | 71.4% | 26.8% |
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 58.0 | 4.88e-01 | 100.0% | 72.5% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 49.0 | 4.79e-01 | 79.4% | 85.5% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 46.0 | 4.74e-01 | 74.6% | 91.5% |
| 2rijA02 | 3.30.60.70 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Trimeric LpxA-like enzymes | 0.64 | 39.0 | 4.54e-01 | 71.4% | 92.7% |
| 4wz2C00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 47.0 | 4.51e-01 | 79.4% | 79.7% |
| 5dinA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 46.0 | 3.70e-01 | 77.8% | 50.0% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.63 | 39.0 | 4.02e-01 | 74.6% | 65.6% |
| 2csyA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 45.0 | 4.67e-01 | 76.2% | 86.7% |
| 2lgvA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 48.0 | 4.16e-01 | 84.1% | 69.0% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 47.0 | 4.56e-01 | 81.0% | 84.1% |
| 5dkaA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 45.0 | 3.93e-01 | 77.8% | 60.4% |
| 3m0fA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 36.0 | 3.35e-01 | 74.6% | 45.6% |
| 1rmdA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 45.0 | 4.08e-01 | 81.0% | 77.9% |
| 4chkB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 43.0 | 3.87e-01 | 77.8% | 78.0% |
| 7r71A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 43.0 | 4.28e-01 | 79.4% | 84.4% |
| 2lxhC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 40.0 | 4.13e-01 | 79.4% | 94.8% |
| 1et9A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 36.0 | 3.13e-01 | 98.4% | 43.6% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1167962 | 3351.2.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › ORF273 protein from Acidianus two-tailed virus › ORF273 protein from Acidianus two-tailed virus › ATV_ORF273 | 0.78 | 69.0 | 4.54e-01 | 100.0% | 25.7% |
| 4027862 | 376.1.1.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 | 0.69 | 49.0 | 4.63e-01 | 74.6% | 89.3% |
| 3591945 | 376.1.1.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 | 0.66 | 45.0 | 4.81e-01 | 71.4% | 92.7% |
| 4028097 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.66 | 47.0 | 4.66e-01 | 76.2% | 85.3% |
| 3738043 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.66 | 51.0 | 4.48e-01 | 84.1% | 77.9% |
| 3196677 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.66 | 56.0 | 5.63e-01 | 95.2% | 100.0% |
| 4566061 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 50.0 | 4.22e-01 | 82.5% | 65.7% |
| 3231525 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.65 | 49.0 | 4.78e-01 | 81.0% | 88.6% |
| 3940086 | 376.1.1.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 | 0.65 | 49.0 | 4.74e-01 | 81.0% | 100.0% |
| 3733760 | 376.1.1.97 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RING_ZNF598 | 0.64 | 44.0 | 4.52e-01 | 71.4% | 88.3% |
| 3721362 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.64 | 51.0 | 5.24e-01 | 87.3% | 100.0% |
| 3257904 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.64 | 48.0 | 4.11e-01 | 81.0% | 69.0% |
| 3475678 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 51.0 | 5.24e-01 | 87.3% | 98.3% |
| 3577683 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 47.0 | 4.47e-01 | 79.4% | 74.7% |
| 3991259 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.63 | 44.0 | 4.57e-01 | 73.0% | 91.7% |
| 3625316 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.63 | 43.0 | 4.57e-01 | 71.4% | 100.0% |
| 165079 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.63 | 45.0 | 4.44e-01 | 76.2% | 85.5% |
| 3182605 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.63 | 46.0 | 4.08e-01 | 77.8% | 60.0% |
| 3239537 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.63 | 47.0 | 4.32e-01 | 79.4% | 82.5% |
| 4011371 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 46.0 | 4.09e-01 | 77.8% | 60.0% |
| 3849195 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.63 | 47.0 | 3.56e-01 | 79.4% | 40.7% |
| 3770354 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.63 | 49.0 | 4.49e-01 | 85.7% | 89.4% |
| 3611350 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.63 | 46.0 | 4.33e-01 | 77.8% | 70.7% |
| 3996137 | 376.1.1.97 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RING_ZNF598 | 0.63 | 44.0 | 4.19e-01 | 74.6% | 70.7% |
| 3818195 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.62 | 46.0 | 4.37e-01 | 79.4% | 77.3% |
| 3922970 | 376.1.1.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 | 0.62 | 47.0 | 4.17e-01 | 81.0% | 87.8% |
| 3737810 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 45.0 | 4.41e-01 | 77.8% | 92.8% |
| 3832507 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.62 | 46.0 | 4.26e-01 | 79.4% | 75.0% |
| 3659589 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 45.0 | 4.53e-01 | 77.8% | 90.8% |
| 3545890 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.62 | 48.0 | 4.96e-01 | 84.1% | 100.0% |
| 3798174 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 50.0 | 4.83e-01 | 87.3% | 100.0% |
| 3390602 | 377.1.1.12 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C5HC2 | 0.62 | 54.0 | 3.96e-01 | 95.2% | 42.5% |
| 3711991 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 46.0 | 3.65e-01 | 81.0% | 47.7% |
| 3645378 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.61 | 42.0 | 4.33e-01 | 71.4% | 88.3% |
| 3527973 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.61 | 45.0 | 4.04e-01 | 79.4% | 67.8% |
| 3831781 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 45.0 | 4.19e-01 | 79.4% | 75.0% |
| 3734069 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.61 | 54.0 | 4.74e-01 | 100.0% | 81.1% |
| 3324521 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.61 | 45.0 | 4.55e-01 | 81.0% | 93.8% |
| 3225707 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.61 | 51.0 | 4.94e-01 | 92.1% | 100.0% |
| 3519350 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 44.0 | 4.36e-01 | 76.2% | 76.9% |
| 3791383 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 48.0 | 4.23e-01 | 87.3% | 66.3% |
| 3759121 | 376.1.1.97 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RING_ZNF598 | 0.60 | 43.0 | 4.73e-01 | 74.6% | 98.0% |
| 3593356 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 44.0 | 4.44e-01 | 77.8% | 85.9% |
| 3254172 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.60 | 45.0 | 3.08e-01 | 81.0% | 26.1% |
| 3779926 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.60 | 44.0 | 4.19e-01 | 77.8% | 72.6% |
| 3226311 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.60 | 44.0 | 4.18e-01 | 77.8% | 78.1% |
| 4325946 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.59 | 49.0 | 4.81e-01 | 92.1% | 94.3% |
| 3881967 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.59 | 52.0 | 4.79e-01 | 96.8% | 96.2% |
| 3200985 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 42.0 | 3.69e-01 | 76.2% | 57.9% |
| 3610584 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 50.0 | 4.31e-01 | 100.0% | 80.0% |
| 3878373 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.57 | 41.0 | 4.04e-01 | 76.2% | 87.1% |
| 3335937 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.56 | 49.0 | 4.22e-01 | 98.4% | 78.0% |
| 3274573 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.56 | 45.0 | 3.92e-01 | 90.5% | 60.0% |
| 4019224 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.53 | 40.0 | 3.24e-01 | 84.1% | 54.6% |
| 2387834 | 5.4.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like | 0.51 | 35.0 | 2.81e-01 | 76.2% | 79.1% |
D2
medium
residues 71-102