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IMGVR_UViG_3300007813_000014-3300007813-Ga0105108_1000331
Arc-VirIMGVR_UViG_3300007813_000014-3300007813-Ga0105108_1000331
Identity
- Kingdom:
- archaea
Quality
85.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-125
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dgrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 27.0 | 3.48e-01 | 80.8% | 89.6% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 26.0 | 3.29e-01 | 82.4% | 84.1% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 37.0 | 3.96e-01 | 92.8% | 85.6% |
| 4ys0A02 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.51 | 36.0 | 3.29e-01 | 72.8% | 92.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932873 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.88 | 84.0 | 7.14e-01 | 100.0% | 68.1% |
| 4987026 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.54 | 34.0 | 3.85e-01 | 74.4% | 89.4% |
| 3964348 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.52 | 27.0 | 3.30e-01 | 95.2% | 78.7% |
| 4882893 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.52 | 37.0 | 3.09e-01 | 75.2% | 79.3% |
| 5036278 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 21.0 | 2.92e-01 | 100.0% | 78.3% |
| 3386585 | 3536.1.1.0 ↗ | a+b complex topology › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains | 0.50 | 27.0 | 3.29e-01 | 97.6% | 82.7% |