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IMGVR_UViG_3300007862_000358-3300007862-Ga0105737_10020385
Arc-VirIMGVR_UViG_3300007862_000358-3300007862-Ga0105737_10020385
Identity
- Kingdom:
- archaea
Quality
94.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-27
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mcwA02 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.81 | 61.0 | 3.72e-01 | 100.0% | 37.8% |
| 2dkzA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.78 | 58.0 | 4.79e-01 | 100.0% | 72.1% |
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.75 | 57.0 | 3.92e-01 | 100.0% | 25.9% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.71 | 54.0 | 3.90e-01 | 100.0% | 27.7% |
| 1kw4A00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.71 | 52.0 | 4.16e-01 | 100.0% | 62.9% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.70 | 54.0 | 3.61e-01 | 100.0% | 22.1% |
| 2f6rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 53.0 | 3.15e-01 | 100.0% | 10.9% |
| 2qm8A03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.68 | 50.0 | 4.13e-01 | 100.0% | 43.1% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.67 | 48.0 | 4.50e-01 | 100.0% | 57.8% |
| 1pk1B00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.67 | 51.0 | 4.04e-01 | 100.0% | 38.6% |
| 5wxuA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 51.0 | 3.27e-01 | 100.0% | 16.7% |
| 3emuA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.65 | 46.0 | 3.10e-01 | 96.3% | 21.5% |
| 1zmbA02 | 6.10.170.10 | Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.65 | 48.0 | 4.64e-01 | 96.3% | 72.2% |
| 2zttA00 | 6.10.140.720 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 48.0 | 3.84e-01 | 100.0% | 38.4% |
| 1vfrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.63 | 46.0 | 2.84e-01 | 100.0% | 12.9% |
| 2r0bA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.62 | 44.0 | 2.95e-01 | 100.0% | 17.2% |
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.62 | 47.0 | 3.99e-01 | 100.0% | 46.7% |
| 1fxzA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 46.0 | 2.98e-01 | 100.0% | 16.5% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.60 | 46.0 | 3.32e-01 | 100.0% | 25.7% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 43.0 | 3.56e-01 | 100.0% | 40.3% |
| 2ifaB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 41.0 | 2.62e-01 | 100.0% | 39.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033804 | 604.12.1.51 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › 5TM-5TMR_LYT | 0.87 | 70.0 | 4.23e-01 | 100.0% | 28.1% |
| 4971720 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.85 | 68.0 | 4.01e-01 | 100.0% | 43.7% |
| 3788880 | 3615.1.1.34 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Mmc1_C | 0.85 | 64.0 | 3.67e-01 | 96.3% | 9.6% |
| 4376682 | 604.39.1.26 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › 5TM-5TMR_LYT | 0.84 | 65.0 | 4.01e-01 | 100.0% | 29.7% |
| 3389858 | 3379.1.1.0 ↗ | extended segments › Photosystem II reaction center protein ycf12 › Photosystem II reaction center protein ycf12 › Photosystem II reaction center protein ycf12 | 0.83 | 65.0 | 5.70e-01 | 100.0% | 57.8% |
| 3686534 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 62.0 | 5.34e-01 | 88.9% | 55.6% |
| 3687321 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.76 | 60.0 | 5.50e-01 | 100.0% | 65.0% |
| 3208982 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.74 | 58.0 | 5.08e-01 | 100.0% | 55.6% |
| 3567359 | 192.15.1.45 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Pcf11_helical | 0.68 | 52.0 | 3.91e-01 | 100.0% | 31.8% |
| 4495082 | 7523.1.1.8 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 | 0.68 | 47.0 | 2.89e-01 | 100.0% | 11.1% |
| 138459 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.67 | 51.0 | 3.23e-01 | 100.0% | 14.2% |
| 3594053 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.66 | 51.0 | 3.16e-01 | 92.6% | 16.2% |
| 3476606 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.66 | 51.0 | 4.06e-01 | 100.0% | 40.6% |
| 4954690 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 52.0 | 3.16e-01 | 100.0% | 13.1% |
| 3758339 | 5086.1.1.65 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › USHBP1_PDZ-bd | 0.62 | 48.0 | 3.54e-01 | 96.3% | 98.9% |
| 3188198 | 3151.1.1.0 ↗ | alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 | 0.62 | 46.0 | 4.40e-01 | 100.0% | 70.0% |