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IMGVR_UViG_3300007965_000231-3300007965-Ga0100401_10127814
Arc-VirIMGVR_UViG_3300007965_000231-3300007965-Ga0100401_10127814
Identity
- Kingdom:
- archaea
Quality
51.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 37-94
D2
medium
residues 367-418
Domain cluster:
rep: OR842557.1__WQZ01098.1__04086_4647__00104__D122-165
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.87 | 75.0 | 5.17e-01 | 96.2% | 30.6% |
| 1wthA02 | 3.10.450.190 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.84 | 75.0 | 5.92e-01 | 98.1% | 50.0% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.78 | 63.0 | 4.93e-01 | 92.3% | 43.0% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.75 | 66.0 | 5.21e-01 | 98.1% | 56.2% |
| 1b44D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.72 | 49.0 | 3.88e-01 | 71.2% | 68.9% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.72 | 61.0 | 4.69e-01 | 94.2% | 42.4% |
| 2v7sA00 | 3.30.2030.20 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.71 | 46.0 | 3.25e-01 | 100.0% | 20.7% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.71 | 59.0 | 4.86e-01 | 94.2% | 57.7% |
| 1ya5T01 | 2.20.160.10 | Mainly Beta › Single Sheet › titin filament fold › titin domain like | 0.71 | 58.0 | 5.06e-01 | 94.2% | 100.0% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.70 | 59.0 | 4.53e-01 | 94.2% | 54.7% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 50.0 | 3.73e-01 | 78.8% | 55.4% |
| 4r1kB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 50.0 | 3.71e-01 | 80.8% | 41.9% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.67 | 56.0 | 4.24e-01 | 94.2% | 56.3% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.66 | 55.0 | 4.17e-01 | 94.2% | 53.5% |
| 3oulA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.66 | 46.0 | 3.05e-01 | 73.1% | 99.5% |
| 3tu3B01 | 3.30.720.80 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.66 | 46.0 | 4.13e-01 | 75.0% | 52.6% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.65 | 54.0 | 4.17e-01 | 94.2% | 70.5% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.65 | 54.0 | 3.37e-01 | 98.1% | 29.3% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 55.0 | 4.03e-01 | 98.1% | 70.2% |
| 3hrpA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.63 | 48.0 | 3.04e-01 | 86.5% | 80.3% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.61 | 51.0 | 3.84e-01 | 100.0% | 95.9% |
| 2jozA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 48.0 | 4.03e-01 | 92.3% | 49.0% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.61 | 46.0 | 2.88e-01 | 86.5% | 52.4% |
| 6xmtA02 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.60 | 49.0 | 3.52e-01 | 94.2% | 53.0% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 48.0 | 3.07e-01 | 98.1% | 41.9% |
| 3of7A00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.59 | 49.0 | 2.96e-01 | 100.0% | 58.9% |
| 5vxzA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 48.0 | 3.28e-01 | 92.3% | 56.5% |
| 6efaA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 43.0 | 3.86e-01 | 82.7% | 80.8% |
| 4ci8A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 46.0 | 2.95e-01 | 94.2% | 35.8% |
| 7mhwA01 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 43.0 | 3.65e-01 | 88.5% | 47.2% |
| 2e63A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.58 | 41.0 | 2.92e-01 | 76.9% | 61.2% |
| 5kiqA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 43.0 | 3.92e-01 | 82.7% | 76.4% |
| 3pijA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.57 | 43.0 | 3.23e-01 | 82.7% | 53.0% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 43.0 | 2.65e-01 | 98.1% | 58.3% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 44.0 | 2.71e-01 | 90.4% | 46.2% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 41.0 | 3.87e-01 | 84.6% | 72.7% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 43.0 | 3.73e-01 | 88.5% | 74.4% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 43.0 | 2.74e-01 | 100.0% | 23.5% |
| 6vp6A03 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 2.70e-01 | 92.3% | 23.9% |
| 1qi9A00 | 1.10.606.10 | Mainly Alpha › Orthogonal Bundle › Vanadium-containing Chloroperoxidase; domain 2 › Vanadium-containing Chloroperoxidase, domain 2 | 0.54 | 43.0 | 2.49e-01 | 90.4% | 43.2% |
| 3v9fA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 2.84e-01 | 100.0% | 46.7% |
| 6eufA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 41.0 | 2.64e-01 | 92.3% | 42.2% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3711004 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.86 | 73.0 | 5.40e-01 | 96.2% | 38.4% |
| 3504473 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.84 | 69.0 | 4.69e-01 | 94.2% | 26.1% |
| 441013 | 79.1.1.1 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp5_C | 0.84 | 75.0 | 4.82e-01 | 98.1% | 23.3% |
| 3471142 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.83 | 72.0 | 4.77e-01 | 98.1% | 25.8% |
| 3231343 | 77.1.1.10 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › PF28998 | 0.83 | 71.0 | 5.21e-01 | 94.2% | 37.7% |
| 4995814 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.83 | 68.0 | 4.74e-01 | 96.2% | 29.4% |
| 4030652 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.82 | 69.0 | 4.91e-01 | 96.2% | 32.0% |
| 3616330 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.81 | 71.0 | 5.16e-01 | 96.2% | 37.0% |
| 3578232 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.81 | 72.0 | 4.62e-01 | 98.1% | 47.6% |
| 5003246 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.80 | 71.0 | 5.05e-01 | 98.1% | 37.3% |
| 3272708 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.78 | 63.0 | 5.48e-01 | 96.2% | 57.5% |
| 4404709 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.78 | 65.0 | 4.46e-01 | 92.3% | 28.0% |
| 3716389 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.78 | 67.0 | 4.07e-01 | 98.1% | 85.5% |
| 4302456 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.76 | 57.0 | 4.73e-01 | 82.7% | 46.7% |
| 3969438 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.74 | 61.0 | 4.94e-01 | 92.3% | 59.0% |
| 4003932 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.73 | 62.0 | 4.70e-01 | 94.2% | 41.7% |
| 3929502 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.73 | 61.0 | 5.01e-01 | 92.3% | 58.5% |
| 3912697 | 292.2.1.3 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 | 0.72 | 62.0 | 4.83e-01 | 96.2% | 59.1% |
| 3972476 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.70 | 60.0 | 4.44e-01 | 100.0% | 66.9% |
| 3705072 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.70 | 59.0 | 4.57e-01 | 94.2% | 98.3% |
| 3725357 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.69 | 60.0 | 3.40e-01 | 98.1% | 9.7% |
| 3265830 | 241.6.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › P34-Arc | 0.68 | 51.0 | 3.99e-01 | 80.8% | 61.7% |
| 4004717 | 3844.1.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C | 0.67 | 48.0 | 3.79e-01 | 76.9% | 37.3% |
| 4179811 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 48.0 | 5.29e-01 | 75.0% | 100.0% |
| 3997716 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.66 | 46.0 | 4.10e-01 | 73.1% | 52.0% |
| 5643 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.66 | 56.0 | 5.09e-01 | 96.2% | 100.0% |
| 3680446 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.66 | 48.0 | 3.57e-01 | 78.8% | 38.5% |
| 5022923 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.65 | 46.0 | 3.99e-01 | 76.9% | 47.1% |
| 4012524 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.63 | 52.0 | 3.16e-01 | 94.2% | 17.8% |
| 4025709 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.63 | 54.0 | 5.10e-01 | 100.0% | 81.5% |
| 5046375 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.62 | 47.0 | 4.15e-01 | 90.4% | 55.0% |
| 3277345 | 7512.1.1.4 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_10 | 0.59 | 50.0 | 2.97e-01 | 98.1% | 26.4% |
| 4969673 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 47.0 | 2.91e-01 | 94.2% | 14.9% |
| 4248250 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.57 | 46.0 | 3.26e-01 | 94.2% | 40.5% |
| 3495411 | 5.1.4.269 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, HELP, Beta-prop_EML | 0.57 | 45.0 | 2.88e-01 | 96.2% | 29.2% |
| 3649123 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 47.0 | 3.02e-01 | 98.1% | 49.5% |
| 2558219 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.56 | 45.0 | 3.31e-01 | 96.2% | 79.6% |
| 3845334 | 10.1.1.23 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neuralized | 0.55 | 43.0 | 3.16e-01 | 92.3% | 66.5% |
| None | — | 0.55 | 44.0 | 2.81e-01 | 98.1% | 39.4% | |
| 1916716 | 5.1.4.63 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PorZ_N_b_propeller | 0.54 | 43.0 | 2.80e-01 | 96.2% | 25.3% |
| 381 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.54 | 43.0 | 3.79e-01 | 88.5% | 78.2% |
| 3889383 | 10.1.1.23 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neuralized | 0.53 | 43.0 | 3.10e-01 | 94.2% | 64.6% |
| 3874056 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.53 | 40.0 | 3.96e-01 | 86.5% | 80.0% |
| 4017127 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 45.0 | 2.90e-01 | 98.1% | 32.1% |
| 3601907 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.52 | 41.0 | 2.92e-01 | 92.3% | 45.1% |