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IMGVR_UViG_3300007985_000016-3300007985-Ga0100381_100023211

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300007985_000016-3300007985-Ga0100381_100023211 ↗
Kingdom:: archaea

Quality

76.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-73

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF16805.12 best	Trans_coact	52.4	5.20e-14	95.7%	86.3%

CATH (17)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3oceA03	1.10.40.30	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain)	0.72	38.0	4.28e-01	81.4%	67.3%
1jswB03	1.10.40.30	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain)	0.67	37.0	4.32e-01	80.0%	76.0%
2wa5A01	1.10.418.10	Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain	0.59	40.0	3.60e-01	71.4%	84.3%
1q5nA03	1.10.40.30	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain)	0.59	36.0	3.49e-01	78.6%	53.1%
3dadA00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.56	48.0	3.18e-01	100.0%	29.0%
4y5jA00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.56	47.0	3.41e-01	100.0%	44.5%
4d7rA01	1.10.220.20	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 ›	0.56	47.0	4.51e-01	100.0%	80.5%
1p2xA00	1.10.418.10	Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain	0.55	39.0	3.07e-01	75.7%	55.3%
7z7vE01	1.10.10.1590	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E	0.53	40.0	4.27e-01	100.0%	96.7%
4lqkA00	1.10.437.20	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus	0.53	41.0	3.51e-01	100.0%	48.5%
1vquA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.53	42.0	4.34e-01	98.6%	92.5%
3axjB02	1.20.58.200	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2	0.52	39.0	3.70e-01	81.4%	85.9%
8an5A01	3.30.460.40	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 ›	0.51	45.0	3.33e-01	100.0%	83.9%
1rm6D04	3.30.365.10	Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain	0.51	39.0	2.83e-01	85.7%	86.0%
1hypA00	1.10.110.10	Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins	0.51	40.0	4.00e-01	92.9%	82.7%
4gtnA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.51	43.0	4.23e-01	100.0%	89.2%
1kagA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.50	36.0	2.82e-01	77.1%	50.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3248244	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.60	47.0	4.77e-01	88.6%	88.6%
5002776	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.57	47.0	4.57e-01	92.9%	85.0%
3363281	109.4.1.929 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ECM29	0.54	45.0	3.32e-01	100.0%	50.9%