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IMGVR_UViG_3300007985_000016-3300007985-Ga0100381_100023228
Arc-VirIMGVR_UViG_3300007985_000016-3300007985-Ga0100381_100023228
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 191-238
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 44.0 | 4.43e-01 | 95.8% | 64.6% |
| 3e3vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 41.0 | 4.03e-01 | 97.9% | 56.6% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 43.0 | 4.32e-01 | 100.0% | 66.0% |
| 1j78A05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.63 | 45.0 | 4.14e-01 | 100.0% | 60.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4449077 | 7061.1.1.0 ↗ | few secondary structure elements › VWF C8-3 module › VWF C8-3 module › VWF C8-3 module | 0.53 | 36.0 | 3.51e-01 | 87.5% | 63.6% |
| 3473299 | 101.1.1.82 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CDH1_2_SANT_HL1 | 0.53 | 46.0 | 3.77e-01 | 100.0% | 76.7% |
D2
medium
residues 1-98
Domain cluster:
rep: IMGVR_UViG_2529293100_000004-2529293100-2531221071__D80-181
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00535.33 best | Glycos_transf_2 | 34.7 | 2.30e-08 | 94.9% | 40.5% |
D3
medium
residues 99-189
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_75050_prodigal-single.1__X__X__00168__D94-125_144-191