Back to structures

IMGVR_UViG_3300007985_000016-3300007985-Ga0100381_100023228

Arc-Vir

IMGVR_UViG_3300007985_000016-3300007985-Ga0100381_100023228

Quality

96.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 191-238
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 44.0 4.43e-01 95.8% 64.6%
3e3vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 41.0 4.03e-01 97.9% 56.6%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 43.0 4.32e-01 100.0% 66.0%
1j78A05 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.63 45.0 4.14e-01 100.0% 60.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4449077 7061.1.1.0 few secondary structure elements › VWF C8-3 module › VWF C8-3 module › VWF C8-3 module 0.53 36.0 3.51e-01 87.5% 63.6%
3473299 101.1.1.82 alpha arrays › HTH › HTH › Three-helical HTH › CDH1_2_SANT_HL1 0.53 46.0 3.77e-01 100.0% 76.7%
D2 medium residues 1-98
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00535.33 best Glycos_transf_2 34.7 2.30e-08 94.9% 40.5%
D3 medium residues 99-189
PDB