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IMGVR_UViG_3300007985_000017-3300007985-Ga0100381_100027519
Arc-VirIMGVR_UViG_3300007985_000017-3300007985-Ga0100381_100027519
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-77
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 47.0 | 4.68e-01 | 95.7% | 88.9% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 43.0 | 3.17e-01 | 91.4% | 69.4% |
| 4qfvC02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.55 | 37.0 | 3.80e-01 | 85.7% | 75.4% |
| 3uitA01 | 1.20.1440.360 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.53 | 39.0 | 3.38e-01 | 82.9% | 92.1% |
| 2ce7B03 | 1.20.58.760 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 | 0.52 | 38.0 | 2.89e-01 | 77.1% | 72.6% |
| 2kvsA00 | 1.10.150.260 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like | 0.52 | 37.0 | 3.56e-01 | 74.3% | 90.0% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 38.0 | 3.29e-01 | 78.6% | 94.5% |
| 6grjB01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.51 | 37.0 | 2.44e-01 | 78.6% | 66.7% |
| 1urvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 42.0 | 3.32e-01 | 95.7% | 48.7% |
| 6g94A00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.50 | 37.0 | 2.85e-01 | 80.0% | 33.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5080904 | 160.1.1.0 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0.59 | 38.0 | 3.04e-01 | 91.4% | 32.9% |
| 3839582 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.56 | 49.0 | 4.45e-01 | 100.0% | 81.1% |
| 5069716 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.56 | 40.0 | 3.67e-01 | 77.1% | 66.3% |
| 4981632 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 40.0 | 3.68e-01 | 78.6% | 78.9% |
| 3972060 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.55 | 40.0 | 3.58e-01 | 78.6% | 64.4% |
| 3688396 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.55 | 45.0 | 3.05e-01 | 94.3% | 45.3% |
| 3720327 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 36.0 | 3.17e-01 | 71.4% | 47.0% |
| 3963378 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.53 | 39.0 | 3.57e-01 | 78.6% | 67.4% |
| 3396168 | 633.2.1.4 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein › Piezo_TM1-24 | 0.52 | 43.0 | 3.53e-01 | 97.1% | 100.0% |
| 3840534 | 622.1.1.5 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › TMEM18 | 0.52 | 38.0 | 3.41e-01 | 85.7% | 55.0% |
| 3962760 | 10.18.1.2 ↗ | beta sandwiches › jelly-roll › VPA0735-like › VPA0735-like › DUF1254 | 0.52 | 43.0 | 2.85e-01 | 100.0% | 48.9% |
| 3499698 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.51 | 45.0 | 3.15e-01 | 100.0% | 63.0% |