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IMGVR_UViG_3300007985_000017-3300007985-Ga0100381_100027546

Arc-Vir

IMGVR_UViG_3300007985_000017-3300007985-Ga0100381_100027546

Identity

Kingdom:
archaea

Quality

78.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 256-410
PDB
Domain cluster: rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074314__D6-141
D2 high residues 416-516
PDB
Domain cluster: rep: IMGVR_UViG_3300003604_000018-3300003604-JGI26464J51801_10016209__D29-123
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yu0A02 2.80.20.10 Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein 0.71 63.0 5.56e-01 98.0% 79.5%
7z0sF01 3.30.70.3270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 40.0 3.43e-01 73.3% 70.8%
1hnfA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 4.32e-01 86.1% 97.5%
4g5aA00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 4.13e-01 84.2% 83.8%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 3.89e-01 91.1% 79.8%
1q25A01 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.50 41.0 3.83e-01 96.0% 71.2%
1k8kC00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 3.00e-01 96.0% 48.9%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038875 4166.1.1.0 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like 0.73 66.0 6.28e-01 97.0% 87.0%
1107991 4166.1.1.4 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › mtd_2nd 0.71 63.0 6.01e-01 98.0% 100.0%
3589732 4166.1.1.2 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Caudo_bapla_N 0.70 65.0 5.56e-01 100.0% 80.6%
1411379 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.61 34.0 3.93e-01 88.1% 78.3%
5025279 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 37.0 3.61e-01 97.0% 60.9%
4002829 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 39.0 4.16e-01 91.1% 95.3%
220332 11.1.1.71 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Adeno_GP19K 0.51 38.0 3.89e-01 91.1% 79.8%
3279144 10.37.1.1 ↗ beta sandwiches › jelly-roll › TerD › TerD › TerD 0.51 41.0 3.52e-01 88.1% 91.2%
3494009 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 32.0 3.39e-01 72.3% 71.1%
5024895 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 35.0 3.99e-01 96.0% 97.3%
3259484 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 37.0 4.03e-01 80.2% 97.5%
D3 high residues 529-712
PDB
Domain cluster: rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00808__D1309-1457
D4 medium residues 752-788
PDB
Domain cluster: rep: NC_048706.1__YP_009838075.1__HWB61_gp62__00018__D123-173
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ylsB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.75 60.0 4.35e-01 91.9% 38.0%
1v73A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.72 63.0 3.64e-01 100.0% 80.7%
2f0cA02 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.71 57.0 4.15e-01 91.9% 57.7%
4tvcA01 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.70 56.0 3.52e-01 89.2% 23.9%
1fy2A00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.70 57.0 3.58e-01 100.0% 95.0%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.69 48.0 2.93e-01 73.0% 14.3%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.69 47.0 3.52e-01 73.0% 30.9%
8adnN01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.68 56.0 3.63e-01 100.0% 42.9%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 55.0 3.27e-01 94.6% 21.1%
5tkwA02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.67 47.0 4.11e-01 83.8% 45.5%
2j8gA02 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.66 51.0 4.05e-01 89.2% 74.4%
1m3qA01 3.30.310.40 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.65 48.0 3.72e-01 81.1% 52.8%
3k85A00 3.30.230.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.65 52.0 3.16e-01 100.0% 56.2%
1w97L02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.65 46.0 3.86e-01 83.8% 40.0%
1x9zA01 3.30.1540.20 Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain 0.65 51.0 3.84e-01 89.2% 88.2%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.64 48.0 3.74e-01 89.2% 69.5%
7zoiA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.64 43.0 3.10e-01 73.0% 62.3%
2mm0A00 2.10.70.110 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.63 51.0 4.31e-01 91.9% 54.7%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 48.0 3.65e-01 91.9% 45.2%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 49.0 2.90e-01 94.6% 19.3%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.62 47.0 3.15e-01 89.2% 35.0%
6fhvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 56.0 4.02e-01 100.0% 76.5%
1i82A00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 48.0 3.17e-01 94.6% 34.4%
1xv2C01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.61 48.0 3.48e-01 100.0% 30.6%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 46.0 3.85e-01 86.5% 68.7%
1b12A02 2.170.230.10 Mainly Beta › Beta Complex › Signal Peptidase I; Chain: A, domain 2 › 0.60 41.0 3.38e-01 70.3% 33.8%
2e9hA01 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.60 40.0 2.93e-01 70.3% 53.1%
4g7nA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 42.0 2.97e-01 83.8% 23.1%
2l1sA00 3.10.450.160 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr 0.59 46.0 3.64e-01 89.2% 57.8%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.59 50.0 4.33e-01 97.3% 71.7%
1qhoA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 52.0 3.71e-01 100.0% 94.4%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.59 44.0 2.71e-01 83.8% 14.5%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 51.0 3.31e-01 100.0% 70.5%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 43.0 3.11e-01 94.6% 50.7%
3e82E02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.59 49.0 3.12e-01 100.0% 75.0%
4phtY02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.58 40.0 3.68e-01 83.8% 48.4%
2gumB01 2.30.30.1230 Mainly Beta › Roll › SH3 type barrels. › 0.58 45.0 3.51e-01 100.0% 42.0%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 44.0 4.02e-01 91.9% 94.6%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.58 46.0 3.00e-01 94.6% 69.7%
4bt2A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.58 42.0 3.30e-01 100.0% 38.6%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.58 43.0 3.26e-01 100.0% 30.8%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.57 41.0 3.55e-01 97.3% 46.4%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.57 46.0 3.79e-01 94.6% 56.9%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 43.0 3.65e-01 94.6% 65.8%
6mjjC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 3.07e-01 89.2% 26.3%
2pt7C01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 43.0 3.28e-01 94.6% 43.4%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.55 38.0 3.25e-01 73.0% 57.6%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.55 41.0 2.72e-01 91.9% 38.1%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 46.0 3.57e-01 94.6% 92.5%
5kiqA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 47.0 3.82e-01 100.0% 58.3%
6efaA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 46.0 3.70e-01 100.0% 67.9%
4pdyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 44.0 3.32e-01 97.3% 76.8%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 47.0 3.62e-01 100.0% 43.7%
4i8iA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 40.0 2.42e-01 81.1% 20.8%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.54 45.0 2.58e-01 100.0% 31.2%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 44.0 2.61e-01 100.0% 15.6%
4bqhA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 42.0 2.39e-01 97.3% 63.1%
6cmzA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 43.0 3.15e-01 100.0% 89.1%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.52 35.0 3.01e-01 70.3% 63.5%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1820980 79.1.1.2 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Hyaluronidase_1 0.92 84.0 5.05e-01 100.0% 17.9%
4970510 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.75 52.0 4.30e-01 70.3% 67.7%
4031431 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.74 56.0 4.67e-01 81.1% 69.2%
3607693 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 56.0 3.34e-01 91.9% 28.2%
3936314 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.71 52.0 5.37e-01 83.8% 94.3%
3999890 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 57.0 3.26e-01 94.6% 18.2%
3210981 5.1.5.73 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N 0.69 59.0 3.43e-01 97.3% 90.1%
3699769 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.69 52.0 3.34e-01 89.2% 23.6%
4302938 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.68 52.0 3.97e-01 100.0% 36.5%
4468810 391.1.2.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.68 47.0 3.32e-01 83.8% 22.4%
3442683 11.1.4.101 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7771 0.67 60.0 4.16e-01 100.0% 90.4%
3507975 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.66 51.0 3.08e-01 91.9% 20.0%
3645846 5.1.4.383 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › VPS11_N 0.66 56.0 3.28e-01 97.3% 88.1%
3846061 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.66 45.0 2.92e-01 70.3% 15.0%
2140348 210.1.1.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.66 56.0 3.63e-01 100.0% 61.5%
3440727 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 56.0 3.02e-01 97.3% 38.2%
3494544 5.1.4.102 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.66 55.0 3.23e-01 100.0% 23.1%
3416069 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.65 48.0 3.96e-01 81.1% 65.7%
3738846 633.23.1.12 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Fig1 0.65 50.0 3.14e-01 100.0% 15.5%
3907934 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 48.0 3.63e-01 89.2% 33.6%
4191161 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.65 43.0 4.33e-01 70.3% 89.7%
3598725 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.65 49.0 3.13e-01 100.0% 16.4%
3847839 6129.1.1.0 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.64 48.0 2.96e-01 94.6% 12.9%
5002631 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.64 55.0 3.91e-01 100.0% 56.5%
5058484 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.63 46.0 3.80e-01 81.1% 67.1%
3505913 221.1.1.112 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_3 0.63 56.0 3.95e-01 100.0% 92.7%
None — 0.62 50.0 3.03e-01 97.3% 98.7%
3939178 304.48.1.37 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 0.62 49.0 3.17e-01 94.6% 76.8%
3847907 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.62 42.0 3.21e-01 70.3% 81.1%
4026796 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.62 50.0 3.72e-01 100.0% 82.6%
3981360 4.1.1.188 ↗ beta barrels › SH3 › SH3 › SH3 › Imm26 0.62 45.0 3.16e-01 83.8% 65.7%
3708221 633.23.1.23 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.62 50.0 3.23e-01 97.3% 19.0%
4032337 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.62 54.0 3.47e-01 100.0% 28.5%
4928207 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.61 41.0 3.39e-01 70.3% 37.3%
3495535 5.1.2.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Beta-prop_WDR19_1st 0.60 44.0 3.03e-01 91.9% 46.5%
185760 292.2.1.2 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB1 0.59 42.0 2.98e-01 83.8% 23.5%
3524259 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.59 52.0 3.30e-01 100.0% 20.0%
3562895 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.59 45.0 3.04e-01 94.6% 33.5%
4021531 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 51.0 3.75e-01 100.0% 37.8%
3509084 5.1.10.10 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › Vps16_N 0.59 48.0 3.93e-01 97.3% 48.6%
4127270 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.58 50.0 3.24e-01 100.0% 21.3%
3990517 5.1.4.502 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IFT80_2nd 0.58 45.0 2.55e-01 100.0% 43.3%
4422293 4959.1.1.0 ↗ a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit 0.58 45.0 3.18e-01 97.3% 27.4%
4937221 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.58 47.0 3.82e-01 94.6% 48.0%
3274295 3862.1.1.5 ↗ extended segments › Envelope small membrane protein › Envelope small membrane protein › Envelope small membrane protein › RENR_N 0.57 49.0 2.75e-01 100.0% 8.4%
2429646 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.57 40.0 3.11e-01 81.1% 28.7%
2801566 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.57 43.0 2.56e-01 97.3% 44.1%
4154416 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.57 48.0 3.12e-01 100.0% 24.0%
3992501 509.1.1.1 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH 0.56 48.0 3.56e-01 94.6% 38.9%
3970340 2.7.1.4 ↗ beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › DUF6484 0.56 41.0 2.93e-01 91.9% 24.0%
3843929 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.55 46.0 2.94e-01 97.3% 20.0%
3947153 4161.1.1.0 ↗ beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like 0.55 44.0 2.69e-01 97.3% 32.0%
4114374 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.55 46.0 2.99e-01 100.0% 23.8%
4200872 4959.1.1.1 ↗ a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 0.54 41.0 3.07e-01 97.3% 29.6%
3971883 79.1.1.0 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.54 39.0 2.31e-01 89.2% 8.1%
3624994 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 37.0 2.23e-01 73.0% 27.3%
4486492 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.52 37.0 2.28e-01 81.1% 11.5%
1731198 79.1.1.13 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp5_trimer_C 0.52 36.0 2.39e-01 78.4% 30.4%
4555163 79.1.1.0 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.52 43.0 3.41e-01 100.0% 45.9%
3751425 389.1.1.93 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_CRD 0.51 37.0 3.37e-01 97.3% 65.7%
5058747 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.50 35.0 3.08e-01 70.3% 98.3%