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IMGVR_UViG_3300007985_000035-3300007985-Ga0100381_100056026
Arc-VirIMGVR_UViG_3300007985_000035-3300007985-Ga0100381_100056026
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 32-89_139-161_188-205
Domain cluster:
representative
D2
medium
residues 90-138_162-187
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.67 | 44.0 | 4.40e-01 | 100.0% | 66.7% |
| 1vqyB01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 41.0 | 3.83e-01 | 100.0% | 61.1% |
| 6cqeA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 37.0 | 3.54e-01 | 96.0% | 59.3% |
| 3blnA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 34.0 | 2.82e-01 | 98.7% | 32.4% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 3.78e-01 | 100.0% | 59.8% |
| 4jg2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 45.0 | 3.38e-01 | 100.0% | 38.4% |
| 6urtA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 4.04e-01 | 100.0% | 76.1% |
| 1t6sB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 30.0 | 3.04e-01 | 77.3% | 55.8% |
| 3atsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 40.0 | 3.53e-01 | 100.0% | 55.2% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 40.0 | 3.85e-01 | 100.0% | 74.1% |
| 3qb8A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 35.0 | 2.68e-01 | 96.0% | 27.9% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 36.0 | 2.37e-01 | 74.7% | 44.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3500222 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.63 | 36.0 | 3.70e-01 | 85.3% | 57.3% |
| 4011868 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.59 | 38.0 | 3.87e-01 | 97.3% | 66.7% |
| 3785110 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 39.0 | 3.27e-01 | 73.3% | 94.1% |
| 3175867 | 101.1.2.781 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30129 | 0.55 | 33.0 | 2.62e-01 | 96.0% | 26.7% |
| 4337990 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.54 | 40.0 | 4.17e-01 | 100.0% | 84.3% |
| 3358465 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 45.0 | 3.00e-01 | 92.0% | 57.7% |
| 3209516 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 40.0 | 2.95e-01 | 100.0% | 27.6% |
| 3406575 | 206.1.1.55 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL | 0.53 | 47.0 | 2.95e-01 | 100.0% | 18.5% |
| 3219903 | 304.9.1.81 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RBD_AKAP-17A | 0.51 | 38.0 | 3.49e-01 | 100.0% | 62.1% |
| 76239 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.51 | 36.0 | 3.18e-01 | 100.0% | 49.1% |
| 4236888 | 304.10.1.0 ↗ | a+b two layers › Alpha-beta plaits › RuBisCO, large subunit, small (N-terminal) domain › RuBisCO, large subunit, small (N-terminal) domain | 0.50 | 44.0 | 3.93e-01 | 100.0% | 68.2% |