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IMGVR_UViG_3300008001_000304-3300008001-Ga0100389_10169651

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300008001_000304-3300008001-Ga0100389_10169651 ↗
Kingdom:: archaea

Quality

85.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-60

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4okcA01	2.90.10.10	Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain	0.61	40.0	3.88e-01	75.0%	59.4%
2p4oA01	2.120.10.30	Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain	0.60	43.0	2.76e-01	76.7%	71.6%
4tkcA00	2.90.10.10	Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain	0.59	40.0	3.20e-01	75.0%	35.6%
4pe5B02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.56	42.0	3.12e-01	83.3%	64.1%
3ho6B00	3.40.50.11050	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain	0.56	39.0	2.66e-01	75.0%	54.9%
2pm6D01	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.53	39.0	2.61e-01	81.7%	60.4%
4pt4B00	4.10.520.10	Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins	0.53	36.0	3.13e-01	71.7%	67.0%
8f66A01	3.60.20.10	Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain	0.53	39.0	2.85e-01	86.7%	51.9%
3ejxA02	3.10.310.10	Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1	0.51	36.0	2.86e-01	76.7%	72.8%
6igbA00	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.51	38.0	2.42e-01	85.0%	57.9%
1y13A00	3.30.479.10	Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD	0.51	40.0	3.09e-01	100.0%	34.4%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3842985	11.1.1.1 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin	0.63	39.0	2.66e-01	91.7%	17.3%
3777158	11.1.1.1 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin	0.62	39.0	2.40e-01	90.0%	10.2%
4679570	386.1.1.69 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › AKAP95	0.62	40.0	2.96e-01	86.7%	25.0%
3938632	214.1.1.0 ↗	a+b two layers › SH2 › SH2 › SH2	0.59	40.0	3.47e-01	71.7%	51.0%
2495545	207.2.1.22 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix	0.58	47.0	2.91e-01	98.3%	38.5%
3442683	11.1.4.101 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7771	0.55	39.0	3.18e-01	76.7%	78.3%
4561895	5.1.3.19 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira	0.54	43.0	3.00e-01	90.0%	62.4%
4112414	2004.1.1.301 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27	0.52	44.0	2.84e-01	100.0%	45.4%
4290367	2498.1.1.40 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M66	0.52	41.0	2.68e-01	90.0%	76.9%