←Back to structures
IMGVR_UViG_3300008001_000321-3300008001-Ga0100389_10020122
Arc-VirIMGVR_UViG_3300008001_000321-3300008001-Ga0100389_10020122
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-86
Domain cluster:
rep: SRR1747065_scaffold_0_prodigal-single.1__X__X__00182__D9-73
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5z6bA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.68 | 40.0 | 3.12e-01 | 85.7% | 27.3% |
| 3fvyA03 | 3.30.70.2600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 39.0 | 4.08e-01 | 94.0% | 64.0% |
| 1ylqA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 47.0 | 4.57e-01 | 100.0% | 69.9% |
| 7n29C01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.64 | 51.0 | 4.21e-01 | 86.9% | 60.1% |
| 1mijA00 | 1.10.10.500 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeo-prospero domain | 0.63 | 44.0 | 3.70e-01 | 71.4% | 57.6% |
| 2h3gX02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 56.0 | 4.55e-01 | 100.0% | 79.9% |
| 4pk9A00 | 3.40.1090.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain | 0.60 | 55.0 | 3.58e-01 | 100.0% | 94.4% |
| 7ztnA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.60 | 54.0 | 3.64e-01 | 98.8% | 96.8% |
| 7o0aD01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.60 | 52.0 | 3.82e-01 | 95.2% | 70.8% |
| 1vsrA00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.60 | 51.0 | 4.44e-01 | 100.0% | 60.4% |
| 3bexA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 45.0 | 4.14e-01 | 82.1% | 100.0% |
| 3ojoB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 44.0 | 3.44e-01 | 81.0% | 66.1% |
| 2zgyA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 47.0 | 4.06e-01 | 89.3% | 77.1% |
| 4o5fA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 45.0 | 3.92e-01 | 83.3% | 100.0% |
| 3ab8A00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 50.0 | 3.58e-01 | 100.0% | 48.7% |
| 3idfA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 49.0 | 4.21e-01 | 100.0% | 69.6% |
| 4n8gD00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.55 | 42.0 | 2.84e-01 | 81.0% | 80.1% |
| 3ju1B00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 41.0 | 2.75e-01 | 81.0% | 60.0% |
| 3kzwA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.54 | 40.0 | 3.29e-01 | 89.3% | 41.8% |
| 3olqA00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 46.0 | 3.25e-01 | 100.0% | 44.4% |
| 6g94A00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.54 | 48.0 | 3.84e-01 | 100.0% | 95.3% |
| 2fsjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 42.0 | 3.69e-01 | 88.1% | 78.3% |
| 3qkiB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 44.0 | 2.90e-01 | 94.0% | 95.0% |
| 4d8qF03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.52 | 41.0 | 3.36e-01 | 85.7% | 61.7% |
| 3kizA01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.52 | 45.0 | 3.72e-01 | 91.7% | 67.4% |
| 6ve6A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 3.23e-01 | 100.0% | 91.4% |
| 6ptzA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 46.0 | 3.98e-01 | 100.0% | 75.4% |
| 1josA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 37.0 | 3.58e-01 | 95.2% | 67.0% |
| 1ygpA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 45.0 | 2.97e-01 | 98.8% | 99.4% |
| 3eofB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.50 | 43.0 | 3.15e-01 | 98.8% | 40.0% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3262617 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 49.0 | 4.50e-01 | 91.7% | 54.5% |
| 4947002 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.70 | 42.0 | 4.55e-01 | 88.1% | 72.5% |
| 3428543 | 604.6.1.23 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › UPF0220 | 0.70 | 53.0 | 4.43e-01 | 79.8% | 66.4% |
| 4532819 | 2484.1.1.287 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RsgI_M | 0.65 | 59.0 | 4.65e-01 | 100.0% | 87.6% |
| 4293297 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.65 | 52.0 | 4.42e-01 | 85.7% | 95.6% |
| 4234891 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.64 | 50.0 | 4.38e-01 | 85.7% | 92.3% |
| 4631490 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.63 | 50.0 | 4.39e-01 | 86.9% | 94.6% |
| 4030380 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.63 | 54.0 | 3.68e-01 | 96.4% | 59.4% |
| 4666966 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 54.0 | 4.61e-01 | 95.2% | 91.9% |
| 3594135 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.62 | 45.0 | 4.34e-01 | 94.0% | 66.0% |
| 3720313 | 2484.1.1.57 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt | 0.62 | 56.0 | 3.87e-01 | 100.0% | 89.8% |
| 3964563 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.62 | 52.0 | 4.45e-01 | 97.6% | 56.4% |
| 4097535 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.62 | 53.0 | 4.61e-01 | 95.2% | 94.6% |
| 3923023 | 109.4.1.587 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mon2_C | 0.62 | 50.0 | 3.28e-01 | 86.9% | 27.8% |
| 11232 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.62 | 49.0 | 4.28e-01 | 86.9% | 92.9% |
| 4156857 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.61 | 53.0 | 4.42e-01 | 95.2% | 86.2% |
| 3931645 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.61 | 54.0 | 3.82e-01 | 97.6% | 91.1% |
| 4666976 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 52.0 | 4.40e-01 | 95.2% | 86.2% |
| 3596601 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.60 | 54.0 | 3.75e-01 | 100.0% | 89.3% |
| 3511625 | 2484.1.1.72 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF | 0.60 | 52.0 | 3.94e-01 | 96.4% | 89.0% |
| 4246382 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.60 | 51.0 | 4.45e-01 | 95.2% | 94.6% |
| 2771816 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.60 | 52.0 | 3.85e-01 | 95.2% | 72.5% |
| 4987229 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.59 | 52.0 | 4.33e-01 | 100.0% | 90.0% |
| 4951031 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.58 | 51.0 | 4.29e-01 | 100.0% | 87.3% |
| 5048618 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 51.0 | 4.35e-01 | 97.6% | 64.4% |
| 3181277 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.58 | 45.0 | 3.35e-01 | 84.5% | 36.9% |
| 3450582 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.58 | 52.0 | 4.51e-01 | 100.0% | 80.0% |
| 3445713 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.58 | 51.0 | 3.59e-01 | 100.0% | 81.0% |
| 4964713 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.58 | 49.0 | 4.11e-01 | 91.7% | 88.6% |
| 2390921 | 7579.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase | 0.58 | 50.0 | 3.49e-01 | 100.0% | 42.6% |
| 3438608 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.58 | 51.0 | 4.01e-01 | 100.0% | 81.1% |
| 3469356 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 50.0 | 4.08e-01 | 100.0% | 76.4% |
| 3666633 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.57 | 50.0 | 4.30e-01 | 98.8% | 63.7% |
| 4926882 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 50.0 | 4.17e-01 | 100.0% | 90.8% |
| 3470605 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 50.0 | 4.20e-01 | 100.0% | 91.3% |
| 4534120 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.57 | 51.0 | 3.80e-01 | 100.0% | 98.6% |
| 3725330 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 42.0 | 2.84e-01 | 77.4% | 63.7% |
| 3731874 | 2007.1.19.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin | 0.57 | 41.0 | 2.78e-01 | 75.0% | 55.3% |
| 3803150 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 51.0 | 3.96e-01 | 100.0% | 69.7% |
| 3290246 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.57 | 47.0 | 4.14e-01 | 100.0% | 62.5% |
| 3179262 | 109.4.1.160 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3384 | 0.56 | 47.0 | 2.88e-01 | 89.3% | 16.9% |
| 4979039 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.56 | 48.0 | 3.51e-01 | 90.5% | 73.7% |
| 4299491 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 50.0 | 4.19e-01 | 100.0% | 86.7% |
| 4274340 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.56 | 48.0 | 3.25e-01 | 96.4% | 48.9% |
| 3451675 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 49.0 | 4.04e-01 | 100.0% | 85.6% |
| 3267040 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 49.0 | 4.17e-01 | 100.0% | 69.2% |
| 3325528 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 49.0 | 3.94e-01 | 100.0% | 77.1% |
| 4945986 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.55 | 48.0 | 3.64e-01 | 100.0% | 74.0% |
| 3973037 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 49.0 | 4.11e-01 | 100.0% | 89.7% |
| 4933889 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 49.0 | 4.26e-01 | 100.0% | 64.7% |
| 3676538 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 49.0 | 3.91e-01 | 100.0% | 88.2% |
| 5048111 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 49.0 | 4.07e-01 | 100.0% | 85.9% |
| 3363171 | 2002.1.1.11 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK | 0.55 | 49.0 | 3.89e-01 | 100.0% | 64.1% |
| 3433431 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.54 | 48.0 | 3.86e-01 | 100.0% | 81.8% |
| 4063231 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.53 | 47.0 | 3.93e-01 | 96.4% | 87.6% |
| 3594644 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.53 | 48.0 | 3.95e-01 | 100.0% | 80.0% |
| 3993467 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.53 | 48.0 | 3.34e-01 | 100.0% | 45.6% |
| 4932807 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.53 | 46.0 | 3.82e-01 | 100.0% | 67.1% |
| 4963947 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.53 | 46.0 | 3.85e-01 | 100.0% | 67.3% |
| 4886704 | 2004.1.1.761 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PapZ_C | 0.52 | 43.0 | 3.89e-01 | 91.7% | 68.3% |
| 3651576 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.52 | 45.0 | 4.24e-01 | 100.0% | 86.1% |
| 3330038 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 46.0 | 3.63e-01 | 100.0% | 74.3% |
| 3670671 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.51 | 44.0 | 3.75e-01 | 100.0% | 73.8% |
| 4932840 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.50 | 43.0 | 3.78e-01 | 97.6% | 79.2% |
| 4084414 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.50 | 44.0 | 3.68e-01 | 95.2% | 69.3% |