←Back to structures
IMGVR_UViG_3300008002_000360-3300008002-Ga0100390_100219237
Arc-VirIMGVR_UViG_3300008002_000360-3300008002-Ga0100390_100219237
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-92
Domain cluster:
rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.94 | 82.0 | 8.62e-01 | 98.8% | 100.0% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 55.0 | 6.23e-01 | 85.5% | 87.7% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 53.0 | 5.84e-01 | 88.0% | 83.8% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 54.0 | 5.95e-01 | 88.0% | 88.2% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 63.0 | 5.33e-01 | 92.8% | 54.6% |
| 4m78N00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 50.0 | 5.39e-01 | 86.7% | 77.5% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 51.0 | 5.47e-01 | 84.3% | 78.9% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 54.0 | 5.66e-01 | 89.2% | 84.0% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 55.0 | 5.64e-01 | 85.5% | 82.1% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.69 | 43.0 | 4.09e-01 | 97.6% | 52.5% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 53.0 | 5.39e-01 | 96.4% | 90.1% |
| 1kf6A04 | 4.10.80.40 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain | 0.63 | 29.0 | 3.98e-01 | 71.1% | 97.1% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 49.0 | 4.12e-01 | 97.6% | 77.6% |
| 2f96A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 44.0 | 3.45e-01 | 89.2% | 83.1% |
| 1dxrH01 | 4.10.540.10 | Few Secondary Structures › Irregular › Photosynthetic Reaction Center; Chain H, domain 1 › Photosynthetic reaction centre, H subunit, N-terminal domain | 0.55 | 25.0 | 2.24e-01 | 94.0% | 27.1% |
| 1ntyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 41.0 | 3.64e-01 | 83.1% | 74.2% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.92e-01 | 84.3% | 84.7% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.52 | 40.0 | 2.95e-01 | 84.3% | 76.2% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.52 | 38.0 | 3.75e-01 | 92.8% | 71.9% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 33.0 | 3.38e-01 | 85.5% | 66.3% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4890477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.92 | 56.0 | 7.11e-01 | 73.5% | 100.0% |
| 4813032 | 4.1.1.328 ↗ | beta barrels › SH3 › SH3 › SH3 › Sm_like | 0.90 | 80.0 | 8.23e-01 | 100.0% | 97.5% |
| 3270749 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.78 | 60.0 | 6.11e-01 | 92.8% | 83.7% |
| 3401273 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.78 | 62.0 | 5.92e-01 | 94.0% | 73.7% |
| 4030048 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.76 | 63.0 | 5.77e-01 | 94.0% | 69.5% |
| 3224038 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.74 | 54.0 | 5.67e-01 | 85.5% | 84.0% |
| 3999729 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.74 | 54.0 | 5.25e-01 | 86.7% | 69.7% |
| 3995481 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 52.0 | 4.90e-01 | 86.7% | 62.0% |
| 3786143 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.72 | 61.0 | 5.61e-01 | 94.0% | 71.4% |
| 3712189 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 57.0 | 5.53e-01 | 92.8% | 77.8% |
| 3786067 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 54.0 | 5.54e-01 | 88.0% | 83.7% |
| 3787684 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 57.0 | 5.22e-01 | 88.0% | 74.3% |
| 3598052 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 55.0 | 5.36e-01 | 95.2% | 80.0% |
| 3978624 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.67 | 44.0 | 3.73e-01 | 88.0% | 42.3% |
| 4017204 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.67 | 56.0 | 5.26e-01 | 91.6% | 82.0% |
| 3618922 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 55.0 | 5.26e-01 | 91.6% | 77.9% |
| 3629780 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.66 | 48.0 | 3.14e-01 | 77.1% | 20.0% |
| 3168996 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 57.0 | 4.91e-01 | 96.4% | 68.0% |
| 3247368 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 34.0 | 3.35e-01 | 71.1% | 50.0% |
| 3741267 | 207.1.1.454 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DIPSY | 0.61 | 35.0 | 4.35e-01 | 100.0% | 96.0% |
| 224086 | 9.18.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.58 | 49.0 | 4.12e-01 | 97.6% | 77.6% |
| 3896126 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.58 | 36.0 | 3.47e-01 | 97.6% | 53.0% |
| 3301882 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.57 | 46.0 | 3.02e-01 | 86.7% | 68.4% |
| 4024769 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.56 | 36.0 | 3.90e-01 | 72.3% | 81.5% |
| 3661724 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 39.0 | 2.63e-01 | 75.9% | 19.4% |
| 5002490 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.55 | 41.0 | 2.66e-01 | 79.5% | 19.7% |
| 3682129 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.54 | 41.0 | 2.68e-01 | 79.5% | 40.3% |
| 5077070 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.54 | 30.0 | 3.44e-01 | 95.2% | 75.0% |
| 3706802 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.52 | 44.0 | 3.01e-01 | 100.0% | 61.8% |
| 3176450 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.51 | 34.0 | 3.09e-01 | 86.7% | 51.4% |
| 3507416 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 40.0 | 3.07e-01 | 85.5% | 60.0% |
| 3739220 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.50 | 42.0 | 3.19e-01 | 95.2% | 94.0% |
| 4116186 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.50 | 35.0 | 2.74e-01 | 73.5% | 62.1% |