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IMGVR_UViG_3300008095_000269-3300008095-Ga0100392_100277711
Arc-VirIMGVR_UViG_3300008095_000269-3300008095-Ga0100392_100277711
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-85
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cg7A02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.70 | 38.0 | 4.78e-01 | 97.4% | 93.2% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 54.0 | 4.37e-01 | 91.0% | 89.8% |
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.64 | 53.0 | 4.16e-01 | 88.5% | 68.6% |
| 2ln7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.63 | 57.0 | 4.56e-01 | 97.4% | 69.4% |
| 1wxrA03 | 3.30.160.280 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 40.0 | 4.11e-01 | 75.6% | 68.4% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.62 | 47.0 | 3.22e-01 | 84.6% | 42.2% |
| 2qdfA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.59 | 51.0 | 5.17e-01 | 97.4% | 97.4% |
| 3gwyB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.57 | 50.0 | 4.22e-01 | 98.7% | 66.9% |
| 3ulpD00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 40.0 | 3.65e-01 | 98.7% | 53.1% |
| 5zliA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.56 | 49.0 | 4.45e-01 | 98.7% | 75.5% |
| 4jzsA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 48.0 | 3.90e-01 | 100.0% | 51.9% |
| 2wn5A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.55 | 40.0 | 3.12e-01 | 79.5% | 66.0% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.55 | 44.0 | 3.65e-01 | 93.6% | 98.8% |
| 3rh7A02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 47.0 | 4.07e-01 | 98.7% | 59.7% |
| 3eesA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 46.0 | 4.02e-01 | 100.0% | 67.2% |
| 4xsgB00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.54 | 40.0 | 3.03e-01 | 79.5% | 64.4% |
| 2rjbA00 | 3.10.180.80 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › Uncharacterised protein PF07063, DUF1338 | 0.54 | 45.0 | 2.84e-01 | 92.3% | 88.8% |
| 1vk6A02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.54 | 47.0 | 4.00e-01 | 100.0% | 64.1% |
| 4jqrA00 | 2.60.120.1350 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 | 0.54 | 42.0 | 2.99e-01 | 83.3% | 44.6% |
| 5wtzA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.53 | 40.0 | 2.99e-01 | 80.8% | 60.6% |
| 1yqyA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.53 | 40.0 | 3.04e-01 | 82.1% | 61.8% |
| 6scxA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 45.0 | 3.90e-01 | 100.0% | 63.7% |
| 4h03A02 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.53 | 39.0 | 2.99e-01 | 80.8% | 63.4% |
| 3gz8C01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 45.0 | 3.85e-01 | 98.7% | 69.1% |
| 4i2yA01 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.53 | 45.0 | 3.31e-01 | 100.0% | 49.6% |
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 43.0 | 4.34e-01 | 97.4% | 93.4% |
| 2azwA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 45.0 | 3.73e-01 | 100.0% | 62.3% |
| 5cfjA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 44.0 | 3.67e-01 | 96.2% | 65.7% |
| 2b0vA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 44.0 | 3.67e-01 | 100.0% | 60.8% |
| 1k2eA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 44.0 | 3.64e-01 | 100.0% | 68.4% |
| 1qs1A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.51 | 37.0 | 2.87e-01 | 79.5% | 63.1% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 42.0 | 4.21e-01 | 96.2% | 93.9% |
| 1ktgA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 44.0 | 3.71e-01 | 98.7% | 67.2% |
| 6n90A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.50 | 42.0 | 4.11e-01 | 97.4% | 98.9% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988254 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.76 | 63.0 | 4.73e-01 | 88.5% | 77.2% |
| 4991697 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.74 | 50.0 | 4.39e-01 | 70.5% | 91.2% |
| 5004416 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 47.0 | 4.26e-01 | 100.0% | 48.6% |
| 4968263 | 1.1.5.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C | 0.71 | 59.0 | 4.26e-01 | 91.0% | 70.9% |
| 4943986 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.68 | 61.0 | 5.19e-01 | 98.7% | 78.4% |
| 5053266 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.68 | 54.0 | 4.31e-01 | 87.2% | 96.2% |
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.67 | 56.0 | 4.48e-01 | 91.0% | 86.5% |
| 5067070 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.67 | 54.0 | 4.45e-01 | 87.2% | 95.0% |
| 5052888 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 60.0 | 5.10e-01 | 98.7% | 69.6% |
| 4992907 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.66 | 55.0 | 4.40e-01 | 91.0% | 89.7% |
| 3602499 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.66 | 59.0 | 4.98e-01 | 98.7% | 76.9% |
| 4950972 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 60.0 | 5.32e-01 | 100.0% | 78.2% |
| 4946578 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.65 | 58.0 | 5.04e-01 | 98.7% | 74.2% |
| 3268549 | 4252.1.1.10 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 | 0.64 | 56.0 | 4.61e-01 | 100.0% | 83.4% |
| 5027270 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.64 | 56.0 | 4.34e-01 | 98.7% | 65.1% |
| 3226032 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 40.0 | 4.73e-01 | 98.7% | 96.2% |
| 5037123 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.63 | 54.0 | 4.65e-01 | 100.0% | 81.5% |
| 3724576 | 4252.1.1.12 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 | 0.62 | 53.0 | 4.73e-01 | 100.0% | 86.7% |
| 3184389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 3.23e-01 | 71.8% | 40.6% |
| 3701671 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.59 | 52.0 | 4.73e-01 | 98.7% | 90.5% |
| 361004 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.58 | 49.0 | 4.25e-01 | 98.7% | 69.0% |
| 4298531 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.57 | 51.0 | 4.53e-01 | 100.0% | 87.0% |
| 4985589 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.57 | 51.0 | 4.13e-01 | 100.0% | 57.3% |
| 3824883 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.57 | 51.0 | 5.01e-01 | 100.0% | 97.6% |
| 3253267 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 37.0 | 3.66e-01 | 70.5% | 62.4% |
| 3482809 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.56 | 47.0 | 3.25e-01 | 97.4% | 34.3% |
| 5059111 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.56 | 48.0 | 4.10e-01 | 97.4% | 68.5% |
| 3931676 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 39.0 | 3.39e-01 | 100.0% | 46.4% |
| 3303285 | 221.4.1.24 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743 | 0.55 | 46.0 | 3.19e-01 | 97.4% | 31.4% |
| 5058171 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.55 | 48.0 | 4.11e-01 | 98.7% | 68.2% |
| 4963179 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.55 | 48.0 | 4.17e-01 | 97.4% | 76.7% |
| 3895419 | 221.4.1.24 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743 | 0.55 | 46.0 | 3.22e-01 | 97.4% | 34.5% |
| 4969719 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.55 | 42.0 | 3.38e-01 | 82.1% | 50.0% |
| 4937938 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.54 | 46.0 | 4.03e-01 | 98.7% | 66.9% |
| 3963568 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.53 | 45.0 | 3.17e-01 | 97.4% | 36.0% |
| 5053953 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.53 | 46.0 | 3.85e-01 | 98.7% | 67.9% |
| 3293466 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 43.0 | 2.89e-01 | 92.3% | 32.4% |
| 3587077 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.53 | 45.0 | 3.75e-01 | 98.7% | 70.7% |
| 4029323 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.53 | 38.0 | 2.54e-01 | 79.5% | 34.4% |
| 4960496 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.53 | 44.0 | 3.70e-01 | 100.0% | 60.7% |
| 4953121 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.53 | 46.0 | 3.98e-01 | 98.7% | 68.8% |
| 4969371 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 46.0 | 3.93e-01 | 100.0% | 69.2% |
| 4942594 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 45.0 | 3.97e-01 | 100.0% | 70.0% |
| 5057737 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 45.0 | 3.84e-01 | 98.7% | 67.7% |
| 4156752 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 45.0 | 3.51e-01 | 98.7% | 56.6% |
| 4935762 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 44.0 | 3.68e-01 | 97.4% | 64.3% |
| 1124600 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 44.0 | 3.68e-01 | 97.4% | 65.5% |
| 5041586 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 43.0 | 3.67e-01 | 97.4% | 64.3% |
| 4944491 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.51 | 44.0 | 3.66e-01 | 97.4% | 65.7% |
| 4941147 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 44.0 | 3.69e-01 | 100.0% | 63.6% |
| 3962194 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.50 | 43.0 | 3.52e-01 | 98.7% | 61.4% |
| 5079769 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.50 | 41.0 | 3.05e-01 | 89.7% | 95.5% |
| 3708545 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.50 | 43.0 | 4.36e-01 | 100.0% | 97.5% |
| 3777810 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.50 | 42.0 | 3.93e-01 | 96.2% | 88.0% |