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IMGVR_UViG_3300008117_001899-3300008117-Ga0114351_101720216
Arc-VirIMGVR_UViG_3300008117_001899-3300008117-Ga0114351_101720216
Identity
- Kingdom:
- archaea
Quality
76.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-76
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nq2A00 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.60 | 45.0 | 3.04e-01 | 83.1% | 62.0% |
| 1w3iA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 45.0 | 3.05e-01 | 85.9% | 87.0% |
| 3memA02 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.55 | 46.0 | 3.09e-01 | 97.2% | 88.7% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 32.0 | 3.66e-01 | 73.2% | 84.0% |
| 1r4aE00 | 1.10.220.60 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › GRIP domain | 0.53 | 35.0 | 3.92e-01 | 70.4% | 94.1% |
| 1ohcA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 39.0 | 3.02e-01 | 80.3% | 100.0% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.52 | 39.0 | 3.52e-01 | 78.9% | 83.5% |
| 4ndoA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.52 | 43.0 | 2.98e-01 | 91.5% | 58.4% |
| 2pl2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 43.0 | 3.29e-01 | 100.0% | 57.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3487676 | 548.1.1.0 ↗ | alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain | 0.61 | 44.0 | 4.64e-01 | 78.9% | 94.9% |
| 3279335 | 1175.1.1.1 ↗ | alpha complex topology › Apolipoprotein N-acyltransferase transmembrane domain › Apolipoprotein N-acyltransferase transmembrane domain › Apolipoprotein N-acyltransferase transmembrane domain › LNT_N | 0.60 | 41.0 | 3.00e-01 | 73.2% | 37.8% |
| 3334461 | 101.1.1.270 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 | 0.58 | 34.0 | 3.38e-01 | 78.9% | 53.3% |
| 4927335 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.57 | 44.0 | 3.53e-01 | 85.9% | 80.7% |
| 3953551 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.54 | 39.0 | 2.93e-01 | 78.9% | 78.5% |
| 5072067 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.53 | 43.0 | 2.74e-01 | 90.1% | 47.1% |
| 3312794 | 101.1.3.22 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › A_thal_3526 | 0.52 | 38.0 | 3.74e-01 | 77.5% | 92.0% |