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IMGVR_UViG_3300008255_001245-3300008255-Ga0100403_100365514

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300008255_001245-3300008255-Ga0100403_100365514 ↗
Kingdom:: archaea

Quality

94.5 mean pLDDT

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-98

PDB

Domain cluster: rep: OY725698.1__CAJ1318049.1__AUSP0114_00007__00007__D2-100

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4obmA00	3.40.630.190	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein	0.69	42.0	3.07e-01	100.0%	22.9%
2zt5A02	3.30.40.230	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 ›	0.65	49.0	5.21e-01	94.8%	90.5%
1sqgA01	1.10.940.10	Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like	0.63	44.0	3.85e-01	71.1%	81.6%
3deeA01	1.10.150.690	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063	0.58	38.0	4.01e-01	99.0%	75.6%
3rf7A02	1.20.1090.10	Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain	0.56	46.0	3.84e-01	89.7%	52.9%
2ckwA04	1.20.960.20	Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A ›	0.54	32.0	3.16e-01	72.2%	55.1%
5cqgA03	1.10.10.2210	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.53	31.0	3.38e-01	91.8%	68.4%
2jgdA03	3.40.50.12470	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.53	46.0	3.47e-01	95.9%	79.0%
7wgrA02	3.40.50.12470	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.53	46.0	3.38e-01	95.9%	88.9%
4f92B10	1.10.3380.10	Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain	0.52	41.0	3.62e-01	83.5%	81.1%
2mjfB00	1.20.1440.260	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.51	36.0	3.66e-01	73.2%	93.7%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3703430	4193.1.1.0 ↗	alpha arrays › RUN domain › RUN domain › RUN domain	0.63	56.0	4.64e-01	100.0%	66.9%
4236667	3615.1.1.0 ↗	alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain	0.60	49.0	3.65e-01	90.7%	56.1%
3600652	7574.1.1.0 ↗	a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding)	0.57	50.0	3.54e-01	95.9%	79.0%
3607587	7574.1.1.8 ↗	a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transket_pyr	0.56	49.0	3.52e-01	95.9%	81.4%
3667071	7574.1.1.8 ↗	a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transket_pyr	0.56	43.0	3.74e-01	81.4%	66.9%
3912405	109.4.1.219 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TINF2_N	0.53	40.0	3.14e-01	80.4%	66.3%
4953264	103.2.1.2 ↗	alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone	0.52	40.0	4.27e-01	100.0%	94.1%
4507907	103.2.1.2 ↗	alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone	0.51	38.0	4.05e-01	100.0%	91.8%
4307412	181.1.1.27 ↗	alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › ATP-cone	0.50	39.0	4.14e-01	100.0%	92.9%
4840	195.1.1.1 ↗	alpha complex topology › NusB-like › NusB-like › NusB-like › NusB	0.50	36.0	3.19e-01	74.2%	76.4%