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IMGVR_UViG_3300008266_006521-3300008266-Ga0114363_10118079
Arc-VirIMGVR_UViG_3300008266_006521-3300008266-Ga0114363_10118079
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-222
Domain cluster:
rep: IMGVR_UViG_3300020139_000054-3300020139-Ga0197143_10042646__D29-208
D2
high
residues 232-285
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hc7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 38.0 | 2.55e-01 | 83.3% | 75.5% |
| 3ke3A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 3.44e-01 | 100.0% | 58.9% |
| 3l7oA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 37.0 | 3.42e-01 | 79.6% | 66.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946755 | 605.1.1.26 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF2058 | 0.62 | 46.0 | 3.72e-01 | 83.3% | 57.4% |
| 4381748 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.57 | 44.0 | 3.04e-01 | 88.9% | 54.0% |
| 4931230 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.53 | 39.0 | 3.32e-01 | 79.6% | 48.9% |
| 3177266 | 109.4.1.2344 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30023, PF30024 | 0.52 | 44.0 | 2.87e-01 | 100.0% | 26.9% |
| 4308205 | 101.1.2.767 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27612 | 0.52 | 42.0 | 3.44e-01 | 100.0% | 58.3% |
| 4059207 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.52 | 39.0 | 2.80e-01 | 90.7% | 74.0% |
| 3963926 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.52 | 37.0 | 3.40e-01 | 92.6% | 55.7% |
| 3245952 | 387.1.3.8 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like › Lustrin_cystein | 0.51 | 41.0 | 4.28e-01 | 94.4% | 100.0% |
| 3783088 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 37.0 | 3.41e-01 | 81.5% | 65.3% |
| 3907776 | 3736.1.1.0 ↗ | alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 | 0.51 | 41.0 | 3.01e-01 | 100.0% | 31.1% |
| 5023262 | 327.11.2.82 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF27275 | 0.50 | 35.0 | 3.37e-01 | 75.9% | 63.1% |