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IMGVR_UViG_3300008266_006874-3300008266-Ga0114363_100396517
Arc-VirIMGVR_UViG_3300008266_006874-3300008266-Ga0114363_100396517
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 155-404
Domain cluster:
rep: LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00177__D121-323
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03796.22 best | DnaB_C | 67.9 | 1.30e-18 | 96.4% | 97.7% |
| PF13481.13 | AAA_25 | 39.3 | 7.70e-10 | 70.4% | 87.2% |
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8dtpC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.91 | 84.0 | 8.41e-01 | 94.8% | 99.6% |
| 3bh0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.89 | 87.0 | 8.22e-01 | 100.0% | 95.4% |
| 4tl8F00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.85 | 70.0 | 7.56e-01 | 99.6% | 98.6% |
| 1cr2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.85 | 75.0 | 7.66e-01 | 100.0% | 94.6% |
| 8db3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.84 | 67.0 | 7.41e-01 | 97.6% | 99.0% |
| 3jzmA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.84 | 72.0 | 7.26e-01 | 99.6% | 89.1% |
| 4a1fB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.83 | 80.0 | 7.37e-01 | 100.0% | 92.8% |
| 1szpB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 66.0 | 7.18e-01 | 100.0% | 99.5% |
| 3io5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 63.0 | 6.11e-01 | 97.2% | 73.4% |
| 8fazD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 71.0 | 7.41e-01 | 96.4% | 98.7% |
| 2dr3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 70.0 | 7.27e-01 | 98.8% | 96.1% |
| 2cvhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 66.0 | 7.08e-01 | 94.8% | 99.1% |
| 4ydsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 67.0 | 7.06e-01 | 98.0% | 96.9% |
| 4wiaC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 67.0 | 7.09e-01 | 98.8% | 98.2% |
| 3ewaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 72.0 | 7.28e-01 | 100.0% | 98.0% |
| 8ouzD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 68.0 | 7.07e-01 | 97.6% | 100.0% |
| 1nlfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 67.0 | 6.66e-01 | 100.0% | 89.4% |
| 8gjaD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 72.0 | 7.04e-01 | 100.0% | 97.8% |
| 8gj8A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 69.0 | 6.91e-01 | 100.0% | 98.8% |
| 4a8jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 66.0 | 6.39e-01 | 100.0% | 94.9% |
| 3vu9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 56.0 | 6.02e-01 | 94.0% | 96.3% |
| 1usgA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 40.0 | 5.07e-01 | 81.6% | 100.0% |
| 3hutA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 41.0 | 5.15e-01 | 81.6% | 100.0% |
| 3td9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 41.0 | 5.13e-01 | 85.2% | 100.0% |
| 4ldaB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 32.0 | 4.38e-01 | 78.8% | 89.0% |
| 3hbmA01 | 3.40.50.11190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 37.0 | 4.87e-01 | 96.4% | 100.0% |
| 3h5lA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 40.0 | 4.84e-01 | 81.6% | 92.1% |
| 4ceiB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 44.0 | 5.22e-01 | 72.8% | 100.0% |
| 3cz5C00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 35.0 | 4.53e-01 | 72.4% | 95.8% |
| 3loqA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 33.0 | 4.40e-01 | 88.8% | 100.0% |
| 4hh3C02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.60 | 32.0 | 4.27e-01 | 81.2% | 96.2% |
| 1kjqA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 30.0 | 4.25e-01 | 89.6% | 99.2% |
| 1f14A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 43.0 | 4.81e-01 | 98.8% | 93.9% |
| 4lyaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 54.0 | 5.17e-01 | 97.2% | 85.8% |
| 1hyeA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 35.0 | 4.50e-01 | 87.6% | 100.0% |
| 1di0A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.58 | 32.0 | 4.07e-01 | 77.6% | 88.5% |
| 1qgnG01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 43.0 | 4.29e-01 | 92.0% | 72.2% |
| 2pzmB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 44.0 | 4.12e-01 | 79.2% | 93.9% |
| 4lw8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 42.0 | 4.54e-01 | 76.0% | 99.1% |
| 4j8lA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 41.0 | 4.14e-01 | 91.6% | 73.9% |
| 2pk3A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 42.0 | 4.49e-01 | 76.8% | 100.0% |
| 3fdxA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 30.0 | 4.04e-01 | 80.4% | 100.0% |
| 3wy7A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 42.0 | 4.32e-01 | 95.2% | 80.9% |
| 4inaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 41.0 | 4.61e-01 | 93.6% | 96.9% |
| 3i6iA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 40.0 | 4.56e-01 | 92.4% | 98.9% |
| 4yrbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 43.0 | 4.67e-01 | 93.6% | 96.6% |
| 1rkxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 39.0 | 4.39e-01 | 73.6% | 92.7% |
| 1mjhB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 33.0 | 4.14e-01 | 82.4% | 100.0% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 30.0 | 3.97e-01 | 82.0% | 99.2% |
| 4zrmA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 42.0 | 4.66e-01 | 92.8% | 100.0% |
| 1a9yA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 4.71e-01 | 92.4% | 100.0% |
| 2c20A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 42.0 | 4.64e-01 | 92.8% | 100.0% |
| 5uaiA01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.54 | 40.0 | 4.36e-01 | 91.2% | 92.7% |
| 3sxpA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 43.0 | 4.65e-01 | 92.8% | 100.0% |
| 4tqgA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 4.14e-01 | 92.4% | 71.7% |
| 3v2bA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.53 | 36.0 | 4.19e-01 | 73.2% | 94.9% |
| 3hgmA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 32.0 | 4.05e-01 | 86.8% | 100.0% |
| 3islA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 42.0 | 4.25e-01 | 89.2% | 82.1% |
| 1o9gA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 39.0 | 4.27e-01 | 88.8% | 93.7% |
| 1bxkA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 4.62e-01 | 94.4% | 99.2% |
| 5ailA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.52 | 36.0 | 4.23e-01 | 84.4% | 98.3% |
| 4id9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 4.52e-01 | 94.0% | 100.0% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 19.0 | 2.82e-01 | 86.8% | 75.3% |
| 2gm3A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 32.0 | 3.98e-01 | 79.6% | 99.3% |
| 1orrC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 4.19e-01 | 96.0% | 99.1% |
| 3idfA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 30.0 | 3.82e-01 | 80.8% | 100.0% |
| 1o94A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 35.0 | 4.09e-01 | 91.2% | 100.0% |
| 5u4qB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 46.0 | 4.30e-01 | 95.6% | 98.0% |
| 1v6zA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.51 | 32.0 | 3.79e-01 | 96.8% | 92.6% |
| 5tt0B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 44.0 | 4.49e-01 | 92.8% | 92.0% |
| 5fszA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 37.0 | 3.77e-01 | 76.8% | 74.7% |
| 5vbfA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.51 | 38.0 | 4.26e-01 | 86.0% | 100.0% |
| 1ajaB00 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.51 | 45.0 | 3.77e-01 | 96.0% | 88.7% |
| 2yy7A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 4.22e-01 | 96.0% | 99.4% |
| 4lgcA00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.50 | 38.0 | 3.32e-01 | 84.4% | 50.4% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2554159 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.91 | 86.0 | 8.11e-01 | 98.0% | 88.4% |
| 4200873 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.90 | 88.0 | 7.08e-01 | 100.0% | 63.0% |
| None | — | 0.90 | 74.0 | 7.96e-01 | 100.0% | 95.5% | |
| None | — | 0.90 | 88.0 | 6.93e-01 | 100.0% | 59.6% | |
| 4522132 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.90 | 88.0 | 6.93e-01 | 100.0% | 60.0% |
| 3979830 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.90 | 88.0 | 6.92e-01 | 100.0% | 59.6% |
| 4055517 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.90 | 87.0 | 6.80e-01 | 100.0% | 62.1% |
| 3589232 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.90 | 86.0 | 6.96e-01 | 98.8% | 62.1% |
| 4030913 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.90 | 86.0 | 8.57e-01 | 98.8% | 99.6% |
| 3962909 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.90 | 87.0 | 7.88e-01 | 100.0% | 82.2% |
| 2988376 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.90 | 83.0 | 8.48e-01 | 97.2% | 98.8% |
| None | — | 0.90 | 73.0 | 7.61e-01 | 100.0% | 88.9% | |
| 4339055 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.89 | 87.0 | 6.92e-01 | 100.0% | 66.3% |
| 4311187 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.89 | 87.0 | 8.06e-01 | 100.0% | 97.3% |
| 4291905 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.89 | 86.0 | 8.02e-01 | 100.0% | 92.0% |
| 3944293 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.89 | 73.0 | 7.52e-01 | 100.0% | 87.5% |
| None | — | 0.89 | 71.0 | 7.90e-01 | 97.6% | 99.5% | |
| 4194684 | 507.1.1.6 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB_C | 0.89 | 87.0 | 6.76e-01 | 100.0% | 60.7% |
| 4214084 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.89 | 87.0 | 6.93e-01 | 100.0% | 60.5% |
| 3946483 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.89 | 86.0 | 8.13e-01 | 100.0% | 94.1% |
| 4163070 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.89 | 73.0 | 7.05e-01 | 100.0% | 76.4% |
| 3512712 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.89 | 84.0 | 6.30e-01 | 97.6% | 47.0% |
| 3081874 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.89 | 86.0 | 8.18e-01 | 100.0% | 94.0% |
| 4548850 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 86.0 | 6.92e-01 | 100.0% | 60.0% |
| 1930951 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.88 | 85.0 | 8.04e-01 | 100.0% | 92.4% |
| 4995772 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.88 | 83.0 | 7.94e-01 | 97.2% | 97.5% |
| 3964521 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.88 | 85.0 | 8.36e-01 | 100.0% | 97.4% |
| 3649232 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.88 | 85.0 | 7.79e-01 | 100.0% | 86.5% |
| 3965288 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 85.0 | 6.93e-01 | 100.0% | 61.4% |
| 4575830 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 85.0 | 6.84e-01 | 100.0% | 59.8% |
| 4585462 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.88 | 85.0 | 8.02e-01 | 100.0% | 87.6% |
| 3942586 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.88 | 85.0 | 8.42e-01 | 100.0% | 98.1% |
| 3807885 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.87 | 85.0 | 6.81e-01 | 100.0% | 61.6% |
| 3940178 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.87 | 85.0 | 7.91e-01 | 100.0% | 91.5% |
| 3583703 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.87 | 83.0 | 7.89e-01 | 98.8% | 98.6% |
| 3230061 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.87 | 83.0 | 7.90e-01 | 98.8% | 97.9% |
| None | — | 0.87 | 84.0 | 6.81e-01 | 100.0% | 60.9% | |
| 3274280 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.86 | 84.0 | 8.09e-01 | 100.0% | 90.9% |
| 3297023 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.86 | 84.0 | 8.08e-01 | 100.0% | 95.6% |
| 3445610 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.86 | 62.0 | 6.69e-01 | 72.8% | 92.6% |
| 5037453 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.85 | 75.0 | 7.81e-01 | 99.2% | 98.3% |
| 4926889 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.84 | 70.0 | 7.60e-01 | 98.4% | 99.5% |
| 5056137 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.84 | 71.0 | 7.37e-01 | 99.6% | 93.1% |
| 3509951 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.84 | 75.0 | 7.72e-01 | 98.8% | 97.4% |
| 4970710 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.83 | 71.0 | 7.57e-01 | 96.4% | 100.0% |
| 5039613 | 2004.1.1.1217 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 | 0.83 | 66.0 | 7.34e-01 | 98.4% | 100.0% |
| 5007980 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.82 | 71.0 | 7.48e-01 | 99.2% | 98.2% |
| 5054489 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.82 | 67.0 | 7.34e-01 | 100.0% | 100.0% |
| 4979473 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.82 | 70.0 | 7.52e-01 | 96.8% | 100.0% |
| 4171287 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.82 | 69.0 | 7.26e-01 | 97.6% | 94.7% |
| 4932356 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.82 | 67.0 | 7.15e-01 | 94.8% | 95.0% |
| 5046110 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.82 | 72.0 | 7.41e-01 | 100.0% | 95.4% |
| 4974886 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.82 | 70.0 | 7.43e-01 | 98.0% | 99.5% |
| 3684165 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.81 | 74.0 | 7.31e-01 | 100.0% | 89.6% |
| None | — | 0.81 | 69.0 | 7.36e-01 | 96.8% | 99.1% | |
| 5075266 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.81 | 71.0 | 7.45e-01 | 100.0% | 98.3% |
| 4999470 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.81 | 69.0 | 7.25e-01 | 97.6% | 96.9% |
| 5023029 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.81 | 73.0 | 7.37e-01 | 100.0% | 94.0% |
| 5025002 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.80 | 70.0 | 7.29e-01 | 100.0% | 97.4% |
| 4417234 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.80 | 69.0 | 7.24e-01 | 100.0% | 97.0% |
| 3602463 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.80 | 65.0 | 7.13e-01 | 96.0% | 99.5% |
| 4158084 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.80 | 70.0 | 7.38e-01 | 97.6% | 100.0% |
| 4223940 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.80 | 71.0 | 7.34e-01 | 100.0% | 97.9% |
| 5077071 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.79 | 68.0 | 7.15e-01 | 99.6% | 97.3% |
| 5044541 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.79 | 69.0 | 6.90e-01 | 98.0% | 88.1% |
| 3854719 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.79 | 75.0 | 7.45e-01 | 100.0% | 94.6% |
| 4452602 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.77 | 71.0 | 6.22e-01 | 99.6% | 68.7% |
| 3471628 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.77 | 69.0 | 6.85e-01 | 93.2% | 99.6% |
| None | — | 0.77 | 70.0 | 6.88e-01 | 99.6% | 89.4% | |
| 4946452 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.76 | 73.0 | 6.98e-01 | 100.0% | 89.1% |
| None | — | 0.76 | 70.0 | 6.47e-01 | 99.2% | 78.0% | |
| 5068261 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.76 | 71.0 | 7.18e-01 | 99.2% | 98.4% |
| 3830575 | 2004.1.1.21 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RecA | 0.76 | 71.0 | 6.49e-01 | 100.0% | 78.1% |
| 3836672 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.76 | 72.0 | 6.82e-01 | 98.4% | 90.5% |
| 3657857 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.75 | 72.0 | 6.98e-01 | 100.0% | 95.2% |
| 3457573 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.74 | 72.0 | 6.83e-01 | 100.0% | 90.1% |
| 3945420 | 2004.1.1.21 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RecA | 0.74 | 70.0 | 6.90e-01 | 99.2% | 100.0% |
| 3510702 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.73 | 70.0 | 7.05e-01 | 98.8% | 100.0% |
| 3199942 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 64.0 | 6.21e-01 | 92.8% | 94.6% |
| 4963630 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 68.0 | 6.53e-01 | 99.6% | 97.1% |
| 3470185 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 63.0 | 6.44e-01 | 94.8% | 97.6% |
| 3288229 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.69 | 43.0 | 5.34e-01 | 86.0% | 100.0% |
| 3585293 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.67 | 43.0 | 4.90e-01 | 84.0% | 82.6% |
| 3653830 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.63 | 37.0 | 4.61e-01 | 78.4% | 91.3% |
| 4120069 | 2003.1.5.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase | 0.62 | 33.0 | 4.50e-01 | 77.6% | 100.0% |
| 5040846 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.61 | 34.0 | 4.46e-01 | 89.2% | 99.3% |
| 1381996 | 2007.1.3.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › AppA_SCHIC | 0.60 | 32.0 | 4.22e-01 | 81.2% | 94.1% |
| 3998329 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.59 | 44.0 | 4.17e-01 | 76.4% | 91.2% |
| 5071204 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 33.0 | 4.15e-01 | 81.6% | 100.0% |
| 3802794 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.52 | 35.0 | 4.10e-01 | 84.0% | 94.4% |
| 3242035 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.52 | 45.0 | 4.09e-01 | 95.2% | 70.3% |
| 5067989 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.51 | 46.0 | 4.26e-01 | 95.6% | 97.2% |
D2
medium
residues 1-137
Domain cluster:
rep: SRR1747045_scaffold_1_prodigal-single.1__X__X__00108__D1-164
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r6aC01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.82 | 55.0 | 6.51e-01 | 75.2% | 97.9% |
| 2r5uC00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.80 | 72.0 | 7.20e-01 | 94.9% | 95.7% |
| 3bgwA01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.78 | 69.0 | 7.09e-01 | 97.8% | 98.5% |
| 4ehsA00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.72 | 57.0 | 5.97e-01 | 100.0% | 91.9% |
| 1lkvX02 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.63 | 33.0 | 3.43e-01 | 97.1% | 52.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4200873 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.85 | 79.0 | 5.37e-01 | 97.1% | 32.3% |
| 4272859 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.83 | 76.0 | 7.43e-01 | 96.4% | 95.2% |
| 4132802 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.82 | 78.0 | 7.50e-01 | 99.3% | 94.0% |
| 4031607 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.81 | 72.0 | 7.33e-01 | 100.0% | 95.6% |
| 4214084 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.81 | 76.0 | 5.17e-01 | 100.0% | 33.3% |
| 4973693 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.77 | 72.0 | 6.74e-01 | 100.0% | 94.5% |
| 4286282 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.75 | 70.0 | 6.62e-01 | 100.0% | 92.5% |
| 3573701 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.73 | 66.0 | 6.67e-01 | 97.8% | 97.8% |
| 4243827 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.69 | 60.0 | 6.12e-01 | 100.0% | 96.3% |
| 4561994 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.68 | 60.0 | 6.13e-01 | 97.1% | 99.2% |
| 4376809 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.66 | 60.0 | 5.99e-01 | 98.5% | 97.1% |
| 3988632 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.65 | 55.0 | 5.62e-01 | 95.6% | 94.6% |
| 4137062 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.65 | 58.0 | 5.80e-01 | 98.5% | 94.2% |
| 3588075 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.55 | 43.0 | 4.33e-01 | 87.6% | 80.0% |