←Back to structures
IMGVR_UViG_3300008268_000037-3300008268-Ga0111491_10007099
Arc-VirIMGVR_UViG_3300008268_000037-3300008268-Ga0111491_10007099
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-90
Domain cluster:
rep: IMGVR_UViG_3300029847_000335-3300029847-Ga0245281_10074120__D9-97
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 41.0 | 3.46e-01 | 70.7% | 60.4% |
| 5karA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.60 | 45.0 | 2.86e-01 | 79.3% | 71.2% |
| 2jmuA01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.60 | 54.0 | 3.99e-01 | 100.0% | 80.8% |
| 1vjhA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 52.0 | 4.61e-01 | 100.0% | 84.2% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.56 | 40.0 | 4.06e-01 | 92.7% | 76.2% |
| 1yreC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 44.0 | 3.38e-01 | 86.6% | 60.4% |
| 2kczA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 48.0 | 3.95e-01 | 100.0% | 86.5% |
| 2yz0A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.54 | 45.0 | 3.83e-01 | 93.9% | 68.8% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 37.0 | 3.49e-01 | 70.7% | 83.7% |
| 3pxpA02 | 3.30.450.180 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 46.0 | 3.59e-01 | 100.0% | 87.4% |
| 7dluA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 42.0 | 4.32e-01 | 100.0% | 89.9% |
| 4nxyA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 42.0 | 3.28e-01 | 85.4% | 99.4% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.53 | 30.0 | 3.70e-01 | 70.7% | 90.2% |
| 1x9yA01 | 3.10.500.10 | Alpha Beta › Roll › prostaphopain b, domain 1 › Staphopain proregion domain | 0.52 | 38.0 | 2.97e-01 | 75.6% | 52.9% |
| 2ewvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 40.0 | 3.73e-01 | 85.4% | 83.3% |
| 3i9sA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 40.0 | 3.20e-01 | 85.4% | 62.1% |
| 1s3zA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 40.0 | 3.33e-01 | 86.6% | 87.1% |
| 3l4gC04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 40.0 | 2.83e-01 | 89.0% | 33.2% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 34.0 | 3.24e-01 | 72.0% | 62.3% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4994595 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.63 | 51.0 | 4.27e-01 | 86.6% | 60.7% |
| 185414 | 3347.1.1.1 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 | 0.60 | 41.0 | 3.47e-01 | 70.7% | 60.9% |
| 3412443 | 246.2.1.5 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,ASMase_C | 0.60 | 45.0 | 2.86e-01 | 80.5% | 70.6% |
| 3283241 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.59 | 53.0 | 4.35e-01 | 100.0% | 91.3% |
| 3386302 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.59 | 42.0 | 4.16e-01 | 90.2% | 71.8% |
| 3708114 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.58 | 52.0 | 4.84e-01 | 100.0% | 81.0% |
| 6304 | 331.3.1.1 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 | 0.58 | 52.0 | 4.61e-01 | 100.0% | 84.2% |
| 3587596 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.57 | 38.0 | 2.97e-01 | 85.4% | 32.0% |
| 3954390 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.56 | 50.0 | 4.13e-01 | 100.0% | 88.5% |
| 3881866 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 42.0 | 3.91e-01 | 100.0% | 62.9% |
| 3281834 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.56 | 47.0 | 3.93e-01 | 91.5% | 95.0% |
| 3962556 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.56 | 50.0 | 4.71e-01 | 100.0% | 89.0% |
| 2325417 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.55 | 37.0 | 3.70e-01 | 95.1% | 64.4% |
| 3972673 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.55 | 49.0 | 4.00e-01 | 100.0% | 76.1% |
| 3280801 | 223.1.1.36 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD | 0.55 | 47.0 | 3.78e-01 | 100.0% | 91.4% |
| 4093191 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.55 | 50.0 | 4.59e-01 | 100.0% | 78.8% |
| 3290055 | 223.1.1.36 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD | 0.54 | 45.0 | 3.65e-01 | 96.3% | 91.2% |
| 3252404 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.53 | 47.0 | 4.47e-01 | 98.8% | 90.5% |
| 223879 | 223.1.1.36 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD | 0.53 | 44.0 | 3.44e-01 | 100.0% | 83.5% |
| 4551342 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 33.0 | 3.33e-01 | 76.8% | 61.2% |
| 3483175 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.52 | 36.0 | 3.66e-01 | 87.8% | 73.8% |
| 3988379 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 42.0 | 3.19e-01 | 86.6% | 49.2% |
| 3891158 | 1.1.7.90 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1 | 0.51 | 41.0 | 3.76e-01 | 98.8% | 65.2% |
| 3652840 | 708.1.1.9 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › CG-1 | 0.51 | 41.0 | 4.11e-01 | 86.6% | 92.9% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.50 | 31.0 | 3.13e-01 | 86.6% | 60.0% |
| 2439920 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.50 | 40.0 | 3.04e-01 | 90.2% | 94.4% |
| 4085416 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 40.0 | 2.97e-01 | 86.6% | 42.3% |
| 5069164 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 40.0 | 3.37e-01 | 86.6% | 64.3% |