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IMGVR_UViG_3300008487_000025-3300008487-Ga0110940_10006422
Arc-VirIMGVR_UViG_3300008487_000025-3300008487-Ga0110940_10006422
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 118-258
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.61 | 36.0 | 4.14e-01 | 100.0% | 79.6% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 27.0 | 3.89e-01 | 95.0% | 89.4% |
| 2w40A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 39.0 | 3.27e-01 | 74.5% | 99.6% |
| 2dgyA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 25.0 | 3.08e-01 | 100.0% | 68.4% |
| 1mbyA00 | 2.40.50.930 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 29.0 | 3.87e-01 | 79.4% | 98.7% |
| 1bu6O01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 38.0 | 3.20e-01 | 73.0% | 99.6% |
| 3hz6A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 38.0 | 3.23e-01 | 76.6% | 99.6% |
| 2itmA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 36.0 | 3.10e-01 | 71.6% | 99.6% |
| 3ll3B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 37.0 | 3.10e-01 | 73.8% | 99.6% |
| 5tdeA01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 36.0 | 3.61e-01 | 95.7% | 68.5% |
| 3cjeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 30.0 | 2.99e-01 | 76.6% | 54.7% |
| 2ch5A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 38.0 | 3.84e-01 | 79.4% | 97.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4284803 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.69 | 26.0 | 2.75e-01 | 77.3% | 38.4% |
| 3281300 | 4.1.1.426 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31188 | 0.68 | 33.0 | 4.60e-01 | 95.0% | 98.5% |
| 327025 | 6048.1.1.1 ↗ | a+b two layers › DUF960-like › DUF960-like › DUF960-like › DUF960 | 0.60 | 36.0 | 4.07e-01 | 100.0% | 78.3% |
| 3598259 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.59 | 34.0 | 3.46e-01 | 95.0% | 57.8% |
| 3714985 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 22.0 | 3.18e-01 | 94.3% | 72.5% |
| 5083421 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.56 | 33.0 | 4.02e-01 | 74.5% | 91.1% |
| 3436557 | 220.4.1.8 ↗ | beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins › ZGRF1-like_N | 0.56 | 29.0 | 3.98e-01 | 92.9% | 96.0% |
| 3686111 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 26.0 | 3.40e-01 | 80.9% | 80.0% |
| 3783851 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.55 | 41.0 | 3.24e-01 | 78.0% | 93.7% |
| 3577733 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.54 | 40.0 | 3.00e-01 | 78.0% | 73.6% |
| 3601594 | 848.1.1.0 ↗ | a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain | 0.53 | 42.0 | 3.27e-01 | 83.7% | 71.1% |
| 1187920 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 28.0 | 3.72e-01 | 70.2% | 100.0% |
| 3277377 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.53 | 39.0 | 3.13e-01 | 76.6% | 99.0% |
| 5046202 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.53 | 38.0 | 3.16e-01 | 74.5% | 94.0% |
| 2755518 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 27.0 | 3.42e-01 | 87.9% | 85.7% |
| 3315951 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.52 | 29.0 | 3.79e-01 | 93.6% | 96.2% |
| 5048669 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.52 | 37.0 | 3.09e-01 | 73.8% | 98.5% |
| 4977998 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 38.0 | 3.11e-01 | 75.9% | 98.5% |
| 5035851 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.51 | 37.0 | 3.15e-01 | 75.9% | 98.0% |
| 4980820 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.51 | 36.0 | 3.32e-01 | 71.6% | 96.7% |
| 5074297 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.51 | 35.0 | 3.00e-01 | 70.9% | 100.0% |
| 3589523 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.51 | 37.0 | 3.12e-01 | 76.6% | 98.4% |
D2
medium
residues 21-91_267-376
Domain cluster:
rep: KT624200.1__AMM44842.1__SP15_043__00044__D22-84_198-292
CATH (81)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.80 | 77.0 | 7.10e-01 | 100.0% | 84.5% |
| 1eucB03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.74 | 49.0 | 5.43e-01 | 94.5% | 82.2% |
| 2x7xA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 43.0 | 5.02e-01 | 95.6% | 81.5% |
| 4hh3C02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.70 | 45.0 | 5.23e-01 | 96.1% | 89.4% |
| 1vc1A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.69 | 38.0 | 4.77e-01 | 93.9% | 87.3% |
| 2vy9A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.69 | 38.0 | 4.73e-01 | 93.9% | 86.0% |
| 1h4xA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.67 | 37.0 | 4.54e-01 | 93.9% | 85.6% |
| 3clkA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 43.0 | 4.79e-01 | 93.9% | 82.1% |
| 2e7jA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.66 | 46.0 | 4.18e-01 | 97.2% | 54.7% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 53.0 | 5.04e-01 | 97.2% | 73.0% |
| 2hsjD00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.61 | 54.0 | 5.09e-01 | 93.9% | 86.4% |
| 3r7wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 52.0 | 5.25e-01 | 96.7% | 91.2% |
| 3rjtA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.61 | 56.0 | 5.29e-01 | 100.0% | 91.6% |
| 6xigA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 48.0 | 4.03e-01 | 82.9% | 76.6% |
| 2exxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 49.0 | 4.75e-01 | 97.8% | 76.4% |
| 2vk2A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 42.0 | 4.35e-01 | 95.0% | 77.0% |
| 4xymC03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.60 | 46.0 | 4.76e-01 | 96.1% | 85.2% |
| 1bwpA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.60 | 52.0 | 4.98e-01 | 93.9% | 88.2% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.59 | 38.0 | 4.37e-01 | 90.6% | 88.6% |
| 4h08A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 51.0 | 4.93e-01 | 100.0% | 83.0% |
| 7pd2B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 48.0 | 3.85e-01 | 86.2% | 72.8% |
| 6hfzA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.58 | 51.0 | 4.79e-01 | 100.0% | 78.5% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.58 | 53.0 | 5.16e-01 | 100.0% | 89.6% |
| 3gdgA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 53.0 | 4.63e-01 | 100.0% | 80.9% |
| 2a5hA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 49.0 | 4.18e-01 | 91.2% | 97.2% |
| 3tp4B01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 52.0 | 4.13e-01 | 98.9% | 69.2% |
| 4xvhA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.57 | 52.0 | 4.89e-01 | 100.0% | 91.9% |
| 8hi4A03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 4.76e-01 | 93.9% | 95.6% |
| 2v25A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 38.0 | 4.38e-01 | 100.0% | 95.4% |
| 3h7aA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 51.0 | 4.82e-01 | 97.2% | 87.7% |
| 2a4kB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 48.0 | 4.73e-01 | 100.0% | 85.2% |
| 3a9iA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 48.0 | 4.17e-01 | 99.4% | 61.7% |
| 1gytL01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.56 | 47.0 | 4.73e-01 | 88.4% | 92.8% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.56 | 42.0 | 4.59e-01 | 90.6% | 97.2% |
| 3kqxL01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.55 | 46.0 | 4.54e-01 | 88.4% | 83.5% |
| 7arcP01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 52.0 | 4.48e-01 | 100.0% | 97.8% |
| 4k7jA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.55 | 50.0 | 4.68e-01 | 99.4% | 85.0% |
| 7o71E01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 51.0 | 4.18e-01 | 100.0% | 96.3% |
| 4pmxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 50.0 | 4.17e-01 | 98.9% | 82.0% |
| 2obnA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 4.41e-01 | 97.8% | 77.1% |
| 5f5nA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 51.0 | 4.30e-01 | 100.0% | 99.3% |
| 5nthA01 | 3.40.50.10590 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Zn-dependent exopeptidases | 0.54 | 42.0 | 4.15e-01 | 80.1% | 78.6% |
| 3dqpA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 4.56e-01 | 97.8% | 78.9% |
| 3wnkA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 49.0 | 4.00e-01 | 98.9% | 86.0% |
| 1rhcA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.54 | 49.0 | 4.04e-01 | 98.9% | 81.8% |
| 1lhpA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 50.0 | 4.15e-01 | 98.9% | 86.6% |
| 3gffA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 45.0 | 3.74e-01 | 89.0% | 76.3% |
| 3qyqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 47.0 | 4.10e-01 | 94.5% | 66.7% |
| 6n2aB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.53 | 42.0 | 3.92e-01 | 94.5% | 64.8% |
| 3jruA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.53 | 42.0 | 4.38e-01 | 92.8% | 92.6% |
| 2qw5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.53 | 47.0 | 3.92e-01 | 98.3% | 87.8% |
| 4ep4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 36.0 | 3.76e-01 | 97.2% | 74.7% |
| 2oodA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 46.0 | 3.80e-01 | 100.0% | 52.9% |
| 3simA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 47.0 | 4.11e-01 | 98.3% | 84.7% |
| 4do7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 45.0 | 3.94e-01 | 95.0% | 84.2% |
| 2hc9A01 | 3.40.50.10590 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Zn-dependent exopeptidases | 0.52 | 39.0 | 4.15e-01 | 95.0% | 90.3% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 47.0 | 4.40e-01 | 98.3% | 100.0% |
| 3kzwA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.52 | 40.0 | 4.27e-01 | 95.0% | 93.0% |
| 3cc1B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 3.85e-01 | 98.3% | 69.7% |
| 5diyA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 47.0 | 3.95e-01 | 98.3% | 62.8% |
| 5swuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 47.0 | 4.25e-01 | 99.4% | 80.5% |
| 7fc0E01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.51 | 45.0 | 3.97e-01 | 96.1% | 65.3% |
| 7lnpA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 46.0 | 3.67e-01 | 96.1% | 59.7% |
| 2c13A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 47.0 | 3.82e-01 | 99.4% | 60.7% |
| 2xsaA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 46.0 | 4.00e-01 | 98.3% | 72.2% |
| 2ozeA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 47.0 | 4.01e-01 | 99.4% | 81.0% |
| 3vovA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 35.0 | 3.80e-01 | 70.2% | 100.0% |
| 5ntfA01 | 3.40.50.10590 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Zn-dependent exopeptidases | 0.51 | 40.0 | 4.09e-01 | 95.0% | 83.4% |
| 1ad1A00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.51 | 45.0 | 4.03e-01 | 98.3% | 78.0% |
| 1o6cB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 47.0 | 4.41e-01 | 100.0% | 85.3% |
| 3paoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 46.0 | 3.84e-01 | 98.9% | 77.7% |
| 2j6vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.51 | 44.0 | 3.84e-01 | 95.0% | 63.2% |
| 3ix7A00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.51 | 26.0 | 2.98e-01 | 97.8% | 63.4% |
| 4f3hA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.51 | 43.0 | 3.88e-01 | 91.2% | 70.4% |
| 3h5dA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 46.0 | 3.91e-01 | 99.4% | 95.0% |
| 4b62A00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.50 | 35.0 | 3.80e-01 | 98.9% | 87.4% |
| 6b6lA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 45.0 | 4.05e-01 | 98.3% | 78.1% |
| 8a57D02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 41.0 | 4.11e-01 | 97.8% | 83.2% |
| 6hq7B02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.50 | 41.0 | 3.63e-01 | 97.8% | 60.0% |
| 5uj6A03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 45.0 | 3.80e-01 | 99.4% | 59.1% |
| 3rhgA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.50 | 45.0 | 3.64e-01 | 100.0% | 83.7% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2842938 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.79 | 75.0 | 6.39e-01 | 98.9% | 81.9% |
| 5060661 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.77 | 72.0 | 6.35e-01 | 97.2% | 77.2% |
| 3714428 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.64 | 41.0 | 4.67e-01 | 95.0% | 85.9% |
| 3584467 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.62 | 50.0 | 5.16e-01 | 90.6% | 88.0% |
| 5079823 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.62 | 47.0 | 4.99e-01 | 95.6% | 89.4% |
| 4326866 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 51.0 | 4.35e-01 | 86.7% | 75.0% |
| 4946557 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.61 | 51.0 | 5.20e-01 | 97.2% | 89.4% |
| 4386896 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 50.0 | 4.23e-01 | 86.2% | 87.9% |
| 4943836 | 2007.22.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Methyl-viologen reducing hydrogenase subunit D › Methyl-viologen reducing hydrogenase subunit D › FlpD | 0.60 | 38.0 | 4.26e-01 | 96.7% | 82.2% |
| 3281788 | 2003.1.1.85 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SpnB_Rossmann | 0.60 | 41.0 | 4.09e-01 | 98.3% | 66.3% |
| 4933582 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 49.0 | 4.22e-01 | 87.8% | 98.9% |
| 2526997 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.58 | 51.0 | 4.67e-01 | 100.0% | 73.0% |
| 5079503 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.58 | 47.0 | 4.73e-01 | 97.2% | 84.3% |
| 4061398 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.57 | 53.0 | 4.92e-01 | 100.0% | 87.6% |
| 3950396 | 2002.1.1.205 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,CofH_C | 0.57 | 50.0 | 3.81e-01 | 93.4% | 85.5% |
| 4544920 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.57 | 47.0 | 4.82e-01 | 86.7% | 92.0% |
| 5052576 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.57 | 49.0 | 4.86e-01 | 97.2% | 89.2% |
| 3838990 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.57 | 48.0 | 4.28e-01 | 91.7% | 84.1% |
| 1498190 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.57 | 52.0 | 4.87e-01 | 100.0% | 91.9% |
| 3284969 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.57 | 53.0 | 4.77e-01 | 100.0% | 91.3% |
| 5045483 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.56 | 52.0 | 4.61e-01 | 100.0% | 81.6% |
| 5074114 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.56 | 52.0 | 4.62e-01 | 100.0% | 82.7% |
| 4440590 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.55 | 46.0 | 4.66e-01 | 86.7% | 92.0% |
| 3695109 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.55 | 51.0 | 4.21e-01 | 100.0% | 97.2% |
| 4422534 | 2003.1.1.122 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SDR | 0.55 | 51.0 | 4.46e-01 | 100.0% | 80.0% |
| 3283281 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.55 | 51.0 | 4.22e-01 | 100.0% | 99.4% |
| 3356490 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.55 | 40.0 | 4.23e-01 | 95.6% | 83.0% |
| 4133209 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.55 | 50.0 | 4.04e-01 | 99.4% | 54.6% |
| 5078079 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.55 | 46.0 | 4.62e-01 | 87.8% | 90.6% |
| 168918 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.55 | 49.0 | 4.66e-01 | 98.3% | 82.0% |
| 4949675 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.54 | 49.0 | 4.09e-01 | 98.9% | 75.3% |
| 4032488 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.54 | 44.0 | 4.17e-01 | 97.8% | 72.9% |
| 4665730 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 50.0 | 4.20e-01 | 100.0% | 90.2% |
| 3617020 | 7529.1.1.8 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Pdase_M17_N2 | 0.54 | 45.0 | 4.57e-01 | 87.3% | 89.7% |
| 3365084 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.54 | 29.0 | 3.82e-01 | 74.6% | 96.8% |
| 3973393 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.54 | 34.0 | 3.73e-01 | 87.8% | 76.0% |
| None | — | 0.54 | 42.0 | 4.08e-01 | 96.7% | 72.7% | |
| 3641662 | 2004.1.1.530 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, AAA_lid_3 | 0.54 | 46.0 | 3.69e-01 | 91.7% | 63.9% |
| 3318301 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.54 | 41.0 | 4.25e-01 | 90.1% | 84.1% |
| 3981506 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.54 | 37.0 | 3.88e-01 | 97.8% | 77.5% |
| 3923486 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.54 | 49.0 | 3.87e-01 | 98.9% | 60.5% |
| None | — | 0.53 | 47.0 | 4.59e-01 | 98.3% | 85.4% | |
| 4102088 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.53 | 47.0 | 4.44e-01 | 95.0% | 98.6% |
| 4611975 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.53 | 48.0 | 3.89e-01 | 98.9% | 75.9% |
| 3964336 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.53 | 36.0 | 3.92e-01 | 97.8% | 82.7% |
| 4927980 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.53 | 47.0 | 3.94e-01 | 98.3% | 83.9% |
| 5014953 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.53 | 46.0 | 4.79e-01 | 94.5% | 100.0% |
| 3335628 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 47.0 | 4.40e-01 | 98.3% | 87.4% |
| 3252818 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 48.0 | 4.32e-01 | 100.0% | 74.4% |
| 4977044 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.52 | 47.0 | 3.94e-01 | 99.4% | 84.0% |
| 3343216 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.52 | 29.0 | 3.44e-01 | 92.8% | 79.2% |
| 5035210 | 7576.1.1.0 ↗ | a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain | 0.52 | 41.0 | 4.30e-01 | 97.2% | 91.5% |
| 3500505 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.52 | 48.0 | 3.72e-01 | 100.0% | 55.7% |
| 3183666 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.51 | 46.0 | 3.60e-01 | 98.9% | 52.0% |
| 4310954 | 7512.1.1.8 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 | 0.51 | 47.0 | 4.47e-01 | 98.3% | 85.7% |
| None | — | 0.51 | 36.0 | 3.92e-01 | 100.0% | 86.7% | |
| 4030295 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 45.0 | 4.36e-01 | 98.3% | 84.7% |
| 3824246 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.51 | 44.0 | 4.13e-01 | 96.7% | 74.7% |
| 5026592 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.51 | 46.0 | 4.44e-01 | 96.1% | 91.6% |
| 5050780 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 47.0 | 3.86e-01 | 98.9% | 76.6% |
| 2527144 | 2002.1.1.150 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase | 0.51 | 46.0 | 3.76e-01 | 98.3% | 61.1% |
| 4093173 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 41.0 | 3.94e-01 | 95.6% | 75.6% |
| 3377847 | 2002.1.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_1 | 0.51 | 44.0 | 3.83e-01 | 96.7% | 93.6% |
| 3379842 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.50 | 32.0 | 3.61e-01 | 96.7% | 82.1% |
| 3739883 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.50 | 47.0 | 3.95e-01 | 100.0% | 99.3% |
| 4534207 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.50 | 45.0 | 4.29e-01 | 97.2% | 90.0% |
D3
medium
residues 377-501
Domain cluster:
rep: IMGVR_UViG_3300007985_000017-3300007985-Ga0100381_100027531__D684-772
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5yk4A04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.56 | 35.0 | 3.41e-01 | 95.2% | 55.1% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.55 | 33.0 | 3.87e-01 | 87.2% | 92.3% |
| 4u9rA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 19.0 | 2.54e-01 | 75.2% | 52.3% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 3.64e-01 | 88.8% | 61.7% |
| 4rayA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 29.0 | 3.42e-01 | 80.0% | 78.8% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 29.0 | 3.07e-01 | 80.0% | 60.9% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 30.0 | 3.15e-01 | 83.2% | 63.9% |
| 2qa4I01 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.50 | 19.0 | 2.63e-01 | 77.6% | 65.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3545474 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 31.0 | 3.57e-01 | 88.8% | 76.7% |
| 4945650 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.51 | 27.0 | 2.95e-01 | 84.0% | 59.0% |
D4
medium
residues 502-586
Domain cluster:
rep: rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00065__D802-873
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.77 | 43.0 | 4.14e-01 | 74.1% | 48.5% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 43.0 | 4.05e-01 | 74.1% | 48.0% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 35.0 | 3.41e-01 | 72.9% | 47.3% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 32.0 | 3.33e-01 | 72.9% | 47.6% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 36.0 | 3.61e-01 | 72.9% | 52.8% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 39.0 | 3.60e-01 | 74.1% | 48.6% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.62 | 31.0 | 3.05e-01 | 71.8% | 40.0% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 38.0 | 3.52e-01 | 70.6% | 50.0% |
| 2nuhA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 38.0 | 3.53e-01 | 70.6% | 51.0% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 38.0 | 3.58e-01 | 71.8% | 52.4% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.61 | 34.0 | 3.16e-01 | 71.8% | 40.7% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.60 | 35.0 | 3.43e-01 | 74.1% | 50.0% |
| 4iyqA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 37.0 | 3.48e-01 | 71.8% | 50.5% |
| 2zomA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 37.0 | 3.41e-01 | 70.6% | 49.5% |
| 2id1A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 33.0 | 3.12e-01 | 71.8% | 42.3% |
| 6tpiB01 | 3.30.70.3040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 40.0 | 3.90e-01 | 74.1% | 71.6% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.57 | 33.0 | 3.23e-01 | 72.9% | 52.1% |
| 4i8qA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 39.0 | 2.81e-01 | 81.2% | 62.3% |
| 7z7vC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.52 | 34.0 | 3.02e-01 | 70.6% | 44.1% |
| 1yukB01 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.52 | 34.0 | 3.54e-01 | 74.1% | 73.1% |
| 1go4A00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.50 | 36.0 | 2.83e-01 | 76.5% | 95.9% |
| 2cz4A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 31.0 | 2.96e-01 | 70.6% | 52.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3980756 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.84 | 62.0 | 5.78e-01 | 89.4% | 62.9% |
| 3949098 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.83 | 65.0 | 5.89e-01 | 91.8% | 63.6% |
| 2468539 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.82 | 69.0 | 6.16e-01 | 94.1% | 65.2% |
| 4957559 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.81 | 62.0 | 5.80e-01 | 82.4% | 67.0% |
| 4086504 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.77 | 43.0 | 4.01e-01 | 74.1% | 44.8% |
| 4899007 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.66 | 38.0 | 4.08e-01 | 70.6% | 66.7% |
| 4373561 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 39.0 | 3.68e-01 | 72.9% | 51.0% |
| 3973305 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.58 | 32.0 | 2.94e-01 | 70.6% | 37.7% |
| 3645131 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 30.0 | 2.82e-01 | 70.6% | 37.3% |
| 3599644 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 39.0 | 2.85e-01 | 70.6% | 35.0% |
| 3964213 | 304.4.1.21 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › FtsX_ECD | 0.56 | 39.0 | 3.73e-01 | 72.9% | 66.0% |
| 4523594 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.53 | 34.0 | 3.09e-01 | 72.9% | 45.8% |
| 3953977 | 304.5.1.2 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF190 | 0.52 | 36.0 | 3.25e-01 | 72.9% | 53.3% |