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IMGVR_UViG_3300008491_000052-3300008491-Ga0111008_1031772
Arc-VirIMGVR_UViG_3300008491_000052-3300008491-Ga0111008_1031772
Identity
- Kingdom:
- archaea
Quality
77.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-74
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hetA01 | 2.60.40.2340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 53.0 | 4.39e-01 | 100.0% | 86.2% |
| 2czrA01 | 3.40.1350.70 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › TBP-interacting protein, N-terminal domain | 0.61 | 42.0 | 3.38e-01 | 100.0% | 35.8% |
| 5lfnD00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.60 | 40.0 | 2.46e-01 | 98.0% | 10.8% |
| 4g6uA02 | 3.40.1350.110 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.60 | 52.0 | 3.84e-01 | 100.0% | 49.3% |
| 5fusA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.60 | 52.0 | 3.44e-01 | 100.0% | 24.3% |
| 2cxcA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.58 | 49.0 | 4.39e-01 | 100.0% | 68.1% |
| 4py9A02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.56 | 48.0 | 3.66e-01 | 100.0% | 41.3% |
| 3rsiB01 | 3.30.300.220 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.53 | 44.0 | 4.19e-01 | 100.0% | 82.8% |
| 5c82A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 45.0 | 3.20e-01 | 100.0% | 30.6% |
| 1vsrA00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.53 | 47.0 | 3.47e-01 | 100.0% | 68.7% |
| 5ve2I00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 43.0 | 2.85e-01 | 100.0% | 21.4% |
| 2dyjA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 45.0 | 3.73e-01 | 100.0% | 61.5% |
| 3eefA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.51 | 36.0 | 2.63e-01 | 80.4% | 67.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3261656 | 2484.1.1.205 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27035 | 0.59 | 52.0 | 3.54e-01 | 100.0% | 84.3% |
| 4937760 | 3930.2.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in endoribonuclease Dicer › Helical bundle in endoribonuclease Dicer | 0.59 | 51.0 | 3.53e-01 | 100.0% | 28.1% |
| 3934924 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.59 | 51.0 | 3.30e-01 | 100.0% | 22.1% |
| 5009814 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 49.0 | 3.70e-01 | 100.0% | 48.1% |
| 4003655 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.58 | 50.0 | 3.22e-01 | 100.0% | 21.2% |
| 5053188 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.57 | 50.0 | 4.42e-01 | 100.0% | 70.7% |
| 3419993 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 50.0 | 2.98e-01 | 100.0% | 26.5% |
| 5026595 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.56 | 50.0 | 4.59e-01 | 100.0% | 86.2% |
| 4977166 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.55 | 49.0 | 3.73e-01 | 100.0% | 49.2% |
| 3805336 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.55 | 41.0 | 2.55e-01 | 96.1% | 14.8% |
| 5069941 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.54 | 43.0 | 3.81e-01 | 100.0% | 60.0% |
| 5024388 | 3156.1.1.3 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Copper-bind | 0.53 | 46.0 | 3.21e-01 | 100.0% | 30.6% |
| 5055016 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.53 | 46.0 | 3.06e-01 | 98.0% | 70.7% |
| 4949964 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.53 | 46.0 | 4.52e-01 | 100.0% | 92.7% |
| 3835991 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.52 | 44.0 | 3.66e-01 | 100.0% | 53.7% |
| 4984909 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.52 | 42.0 | 4.07e-01 | 100.0% | 80.0% |
| 3646685 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.51 | 43.0 | 3.99e-01 | 100.0% | 91.4% |