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IMGVR_UViG_3300008953_000112-3300008953-Ga0104241_10003103
Arc-VirIMGVR_UViG_3300008953_000112-3300008953-Ga0104241_10003103
Identity
- Kingdom:
- archaea
Quality
79.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-121
Domain cluster:
rep: IMGVR_UViG_3300008953_000112-3300008953-Ga0104241_10003105__D41-125
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 42.0 | 4.01e-01 | 100.0% | 50.0% |
| 7q61A01 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 43.0 | 4.00e-01 | 100.0% | 49.5% |
| 4aw7A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 36.0 | 3.29e-01 | 100.0% | 37.3% |
| 3lb6C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 31.0 | 3.11e-01 | 100.0% | 39.8% |
| 3waiA02 | 2.60.40.3390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 42.0 | 4.13e-01 | 100.0% | 60.2% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 43.0 | 3.54e-01 | 100.0% | 37.8% |
| 3bgaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 43.0 | 4.00e-01 | 100.0% | 54.1% |
| 1tnrA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 43.0 | 3.72e-01 | 100.0% | 42.4% |
| 6x3aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 43.0 | 4.08e-01 | 100.0% | 57.7% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 43.0 | 3.69e-01 | 98.9% | 43.8% |
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 39.0 | 3.89e-01 | 100.0% | 58.9% |
| 2n59A00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 39.0 | 3.77e-01 | 100.0% | 54.5% |
| 6p3xB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.61 | 40.0 | 3.17e-01 | 100.0% | 32.8% |
| 1hq6B00 | 3.50.20.10 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B | 0.61 | 45.0 | 3.40e-01 | 100.0% | 30.7% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.60 | 42.0 | 3.98e-01 | 100.0% | 60.6% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.59 | 36.0 | 4.18e-01 | 97.7% | 88.3% |
| 5jpnB04 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 34.0 | 3.09e-01 | 98.9% | 40.5% |
| 5e55B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 36.0 | 3.57e-01 | 100.0% | 57.0% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 42.0 | 3.73e-01 | 100.0% | 53.7% |
| 1uc6A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 34.0 | 3.20e-01 | 100.0% | 45.0% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 39.0 | 3.25e-01 | 98.9% | 39.7% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 37.0 | 3.90e-01 | 98.9% | 73.7% |
| 4ag4A02 | 2.60.120.1190 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 38.0 | 3.05e-01 | 100.0% | 32.6% |
| 3hrzC01 | 2.20.210.20 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.57 | 32.0 | 3.91e-01 | 96.6% | 95.9% |
| 4gs7C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 34.0 | 3.35e-01 | 100.0% | 53.1% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.56 | 41.0 | 3.39e-01 | 100.0% | 42.2% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 38.0 | 4.17e-01 | 97.7% | 88.7% |
| 3fn9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 36.0 | 3.32e-01 | 100.0% | 49.2% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.53 | 32.0 | 3.04e-01 | 100.0% | 45.9% |
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.53 | 47.0 | 2.98e-01 | 100.0% | 61.7% |
| 3nngA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 33.0 | 2.80e-01 | 100.0% | 34.6% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.53 | 34.0 | 3.61e-01 | 97.7% | 74.0% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 35.0 | 3.66e-01 | 97.7% | 78.9% |
| 1flmA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 35.0 | 3.18e-01 | 98.9% | 50.0% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3338688 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.74 | 47.0 | 5.33e-01 | 100.0% | 87.7% |
| 3555863 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.68 | 39.0 | 3.46e-01 | 100.0% | 38.4% |
| 3609926 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.68 | 49.0 | 4.26e-01 | 100.0% | 50.8% |
| 4139517 | 11.1.1.1050 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3, PF28407 | 0.68 | 38.0 | 2.75e-01 | 100.0% | 19.2% |
| 5033505 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 45.0 | 4.20e-01 | 100.0% | 55.5% |
| 5012230 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 38.0 | 3.70e-01 | 100.0% | 53.7% |
| 3891681 | 11.1.1.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind | 0.63 | 38.0 | 3.38e-01 | 100.0% | 40.8% |
| 3204836 | 2492.1.1.32 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › OTT_1508_deam | 0.63 | 42.0 | 3.49e-01 | 100.0% | 38.7% |
| 3224577 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 38.0 | 3.50e-01 | 100.0% | 46.1% |
| 5027725 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 39.0 | 2.82e-01 | 100.0% | 22.9% |
| 3568886 | 2492.1.1.29 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC4_like | 0.61 | 36.0 | 2.77e-01 | 100.0% | 23.7% |
| 3265857 | 299.1.1.0 ↗ | a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain | 0.60 | 36.0 | 3.35e-01 | 97.7% | 46.4% |
| 4943952 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 39.0 | 3.40e-01 | 100.0% | 41.4% |
| 223776 | 3115.4.1.1 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 | 0.60 | 37.0 | 4.02e-01 | 98.9% | 76.1% |
| 3905094 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.59 | 43.0 | 3.72e-01 | 100.0% | 49.6% |
| 3622256 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.59 | 39.0 | 3.26e-01 | 98.9% | 38.1% |
| 4942730 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 36.0 | 3.60e-01 | 100.0% | 56.8% |
| 3508212 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.58 | 37.0 | 3.97e-01 | 100.0% | 78.6% |
| 5065436 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 36.0 | 3.99e-01 | 98.9% | 87.5% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 37.0 | 4.18e-01 | 100.0% | 96.7% |
| 2831852 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 37.0 | 3.56e-01 | 97.7% | 58.4% |
| 3565481 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 33.0 | 3.12e-01 | 100.0% | 46.7% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 33.0 | 3.11e-01 | 100.0% | 46.7% |
| 3411558 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.56 | 41.0 | 3.60e-01 | 100.0% | 50.0% |
| 3509244 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.55 | 43.0 | 3.49e-01 | 100.0% | 44.2% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 36.0 | 4.05e-01 | 98.9% | 98.3% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 36.0 | 4.04e-01 | 98.9% | 98.3% |
| 4128974 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 36.0 | 3.80e-01 | 98.9% | 75.0% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 38.0 | 4.31e-01 | 97.7% | 98.5% |
| 3227513 | 3115.1.1.3 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › NRF | 0.54 | 41.0 | 3.91e-01 | 100.0% | 68.6% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.54 | 42.0 | 2.81e-01 | 84.1% | 71.5% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.53 | 35.0 | 3.77e-01 | 98.9% | 80.0% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.53 | 36.0 | 3.88e-01 | 97.7% | 87.1% |
| 3586708 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.53 | 37.0 | 2.72e-01 | 97.7% | 27.2% |
| 3939862 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 42.0 | 3.90e-01 | 100.0% | 68.2% |
| 5030993 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.53 | 33.0 | 3.43e-01 | 100.0% | 68.8% |
| 4084879 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.52 | 34.0 | 3.44e-01 | 98.9% | 68.2% |
| 3738025 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.51 | 44.0 | 3.60e-01 | 100.0% | 50.0% |
| 4944742 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.49e-01 | 100.0% | 56.2% |
| 2106285 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.51 | 32.0 | 3.09e-01 | 100.0% | 50.9% |
| 4021527 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 40.0 | 2.56e-01 | 83.0% | 45.8% |
| 4146398 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.50 | 38.0 | 3.08e-01 | 81.8% | 45.9% |