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IMGVR_UViG_3300009031_000991-3300009031-Ga0103682_100278484

Arc-Vir

IMGVR_UViG_3300009031_000991-3300009031-Ga0103682_100278484

Quality

93.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-98
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oikA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.92 75.0 6.47e-01 100.0% 59.0%
3p0tA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.90 73.0 6.39e-01 100.0% 60.3%
5cs2A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.88 76.0 6.41e-01 100.0% 59.2%
1emsA02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.88 76.0 6.72e-01 100.0% 66.9%
2eo4A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.86 74.0 6.26e-01 100.0% 58.4%
3anoA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.86 75.0 6.18e-01 100.0% 55.7%
3l7xA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.84 71.0 5.92e-01 100.0% 55.4%
1vkvA01 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.83 74.0 5.86e-01 100.0% 50.6%
3r6fA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.82 65.0 5.82e-01 100.0% 62.3%
4zglD00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.80 67.0 6.60e-01 100.0% 83.3%
1gupB01 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.80 69.0 5.66e-01 100.0% 52.9%
4ndhB00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.78 64.0 5.19e-01 100.0% 47.8%
1av5A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.77 65.0 6.13e-01 100.0% 77.0%
1st0A02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.73 64.0 5.12e-01 100.0% 49.2%
3spdA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.72 66.0 5.13e-01 100.0% 51.0%
5bv3D02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.69 60.0 4.77e-01 100.0% 46.7%
6gbsA02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.69 62.0 4.81e-01 100.0% 45.8%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.64 47.0 4.39e-01 100.0% 62.5%
1bdfA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.63 46.0 4.48e-01 95.9% 68.9%
3ramA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 47.0 4.43e-01 94.8% 67.8%
4noiA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.60 42.0 4.21e-01 94.8% 69.9%
3byqA00 3.30.1330.110 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 0.59 50.0 4.07e-01 94.8% 86.4%
4ewtA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 46.0 4.38e-01 94.8% 71.3%
2qtpA00 3.30.1330.110 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 0.58 48.0 4.27e-01 92.8% 97.3%
2e8yA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 43.0 4.46e-01 100.0% 86.7%
2iayA00 3.30.1820.10 Alpha Beta › 2-Layer Sandwich › Lp2179-like fold › Lp2179-like 0.56 41.0 3.91e-01 79.4% 65.8%
3kulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 41.0 4.30e-01 100.0% 85.4%
4ok4A02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 49.0 3.35e-01 100.0% 62.6%
1y10B02 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.54 44.0 3.56e-01 100.0% 46.4%
1na8B00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.53 43.0 3.80e-01 100.0% 59.3%
2qdfA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.53 39.0 4.18e-01 92.8% 92.8%
2wz1B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.52 47.0 3.74e-01 100.0% 54.6%
4ft4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 47.0 3.17e-01 100.0% 66.2%
4dkjA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 45.0 3.29e-01 100.0% 65.5%
3bb5A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 41.0 4.02e-01 85.6% 81.6%
2vfrA04 3.30.70.2520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 4.00e-01 100.0% 83.0%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 44.0 3.41e-01 95.9% 89.9%
5b08A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 39.0 3.89e-01 88.7% 82.0%
3d3sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 44.0 3.82e-01 100.0% 76.7%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 39.0 3.88e-01 95.9% 82.8%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4932610 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.93 76.0 6.86e-01 100.0% 65.6%
4942898 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.92 75.0 6.80e-01 100.0% 65.6%
5083780 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.92 75.0 6.69e-01 100.0% 63.1%
5073680 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.92 76.0 6.97e-01 100.0% 69.2%
5067744 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.92 75.0 6.74e-01 100.0% 65.6%
5053886 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.91 75.0 6.38e-01 100.0% 57.2%
3385827 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.91 71.0 6.54e-01 99.0% 65.8%
3987497 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.91 73.0 6.12e-01 100.0% 52.9%
3282524 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.89 75.0 6.48e-01 100.0% 60.7%
5024594 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.89 74.0 6.53e-01 100.0% 63.0%
4937580 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.89 77.0 6.27e-01 100.0% 54.4%
5058218 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.88 76.0 6.47e-01 100.0% 60.8%
4932382 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.88 76.0 6.41e-01 100.0% 58.7%
3493745 312.1.1.6 a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 0.88 69.0 5.14e-01 100.0% 35.9%
3206534 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.87 75.0 5.76e-01 100.0% 44.6%
4026166 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.87 75.0 5.96e-01 100.0% 49.7%
4991693 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.87 76.0 6.29e-01 100.0% 56.8%
2850632 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.87 74.0 7.22e-01 100.0% 82.1%
4947704 312.1.1.0 a+b three layers › HIT-like › HIT-related › HIT-related 0.87 73.0 6.20e-01 100.0% 58.6%
4971261 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.86 75.0 6.32e-01 100.0% 58.7%
165749 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.86 74.0 6.26e-01 100.0% 58.4%
4937399 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.86 74.0 6.33e-01 100.0% 60.0%
5029481 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.86 70.0 6.56e-01 100.0% 71.3%
4998447 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.86 74.0 6.09e-01 100.0% 54.4%
3820574 312.1.1.6 a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 0.85 68.0 5.12e-01 100.0% 37.7%
5024844 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.85 73.0 6.32e-01 100.0% 62.1%
3368430 312.1.1.6 a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 0.85 68.0 5.10e-01 100.0% 37.7%
381837 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.85 73.0 6.41e-01 100.0% 64.9%
4929188 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.85 73.0 6.69e-01 100.0% 72.5%
136088 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.85 72.0 6.24e-01 100.0% 60.8%
5027448 312.1.1.0 a+b three layers › HIT-like › HIT-related › HIT-related 0.85 72.0 6.05e-01 100.0% 56.1%
3378008 312.1.1.16 a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_1 0.85 67.0 6.06e-01 100.0% 63.3%
3935133 312.1.1.6 a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 0.84 70.0 5.17e-01 100.0% 37.0%
3732123 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.84 74.0 5.73e-01 100.0% 47.1%
3733772 312.1.1.6 a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 0.84 69.0 4.99e-01 100.0% 33.6%
3259781 312.1.1.6 a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 0.84 71.0 5.33e-01 100.0% 40.2%
3599177 312.1.1.0 a+b three layers › HIT-like › HIT-related › HIT-related 0.84 72.0 6.73e-01 100.0% 75.7%
5052218 312.1.1.0 a+b three layers › HIT-like › HIT-related › HIT-related 0.84 71.0 5.99e-01 100.0% 56.1%
3990818 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.84 78.0 6.30e-01 100.0% 57.0%
4991021 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.84 71.0 6.22e-01 100.0% 63.7%
3642433 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.84 71.0 6.11e-01 100.0% 60.0%
4011319 312.1.1.0 a+b three layers › HIT-like › HIT-related › HIT-related 0.84 70.0 5.05e-01 100.0% 34.4%
4945216 312.1.1.0 a+b three layers › HIT-like › HIT-related › HIT-related 0.83 74.0 6.06e-01 100.0% 55.2%
4931930 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.83 72.0 5.87e-01 100.0% 53.3%
4977050 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.83 77.0 6.14e-01 100.0% 54.3%
5052217 312.1.1.0 a+b three layers › HIT-like › HIT-related › HIT-related 0.80 74.0 5.33e-01 100.0% 54.5%
3631238 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.80 75.0 6.05e-01 99.0% 57.1%
4930045 312.1.1.10 a+b three layers › HIT-like › HIT-related › HIT-related › DUF4931_N 0.79 74.0 6.54e-01 100.0% 73.3%
3244886 312.1.1.17 a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_transf+GalP_UDP_tr_C 0.79 71.0 4.73e-01 100.0% 27.4%
5057084 312.1.1.1 a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_transf 0.78 74.0 4.97e-01 100.0% 33.9%
4998601 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.78 73.0 6.38e-01 100.0% 69.3%
3931249 312.1.1.5 a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_tr_C 0.78 71.0 5.64e-01 100.0% 52.2%
4206695 312.1.1.5 a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_tr_C 0.77 72.0 5.81e-01 100.0% 56.0%
None 0.77 66.0 6.22e-01 100.0% 77.2%
3398596 312.1.1.8 a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.77 64.0 5.61e-01 100.0% 61.4%
4873159 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.77 64.0 6.11e-01 100.0% 78.4%
3239062 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.74 62.0 5.60e-01 100.0% 66.9%
149483 312.1.1.8 a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.74 62.0 5.83e-01 100.0% 74.6%
3621093 312.1.1.8 a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.73 64.0 5.50e-01 100.0% 62.0%
3262832 312.1.1.2 a+b three layers › HIT-like › HIT-related › HIT-related › HIT 0.73 64.0 5.81e-01 100.0% 72.6%
4480656 312.1.1.8 a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.72 61.0 5.29e-01 100.0% 60.7%
3744424 312.1.1.6 a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 0.72 64.0 4.93e-01 100.0% 44.7%
3476783 312.1.1.8 a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.72 59.0 5.31e-01 100.0% 64.4%
1823408 312.1.1.8 a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.72 65.0 5.01e-01 100.0% 47.6%
4000149 312.1.1.8 a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.71 56.0 5.72e-01 88.7% 86.3%
3187966 312.1.1.8 a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.71 63.0 4.86e-01 100.0% 45.9%
3786878 312.1.1.11 a+b three layers › HIT-like › HIT-related › HIT-related › Ap4A_phos_N 0.70 64.0 5.16e-01 100.0% 54.9%
3607007 306.5.1.0 a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP 0.68 43.0 4.00e-01 93.8% 50.8%
3741544 11.1.1.44 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 0.64 48.0 4.56e-01 100.0% 67.0%
5020745 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.63 47.0 4.78e-01 78.4% 91.6%
5004725 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.60 45.0 4.39e-01 78.4% 95.2%
3969252 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.58 39.0 3.56e-01 70.1% 63.7%
5018724 872.3.1.0 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.58 43.0 4.41e-01 78.4% 91.6%
3728575 312.1.1.9 a+b three layers › HIT-like › HIT-related › HIT-related › DUF3605 0.58 52.0 4.07e-01 100.0% 57.6%
3606930 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.57 51.0 4.92e-01 100.0% 89.0%
2528752 304.114.1.2 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain › POL3_N 0.57 35.0 3.54e-01 82.5% 59.8%
4541115 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.57 41.0 3.81e-01 93.8% 59.2%
4397160 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.56 41.0 3.83e-01 94.8% 60.8%
3510623 872.3.1.7 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 0.55 40.0 3.63e-01 78.4% 56.6%
4199523 3121.1.1.13 a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Spore_II_R 0.55 46.0 4.43e-01 92.8% 87.8%
1124197 304.141.1.1 a+b two layers › Alpha-beta plaits › Avirulence Effector AvrLm4-7 › Avirulence Effector AvrLm4-7 › AvrLm4-7 0.54 37.0 3.44e-01 77.3% 53.8%
3600115 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.52 42.0 3.01e-01 91.8% 73.1%