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IMGVR_UViG_3300009100_000053-3300009100-Ga0075418_1000361915

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300009100_000053-3300009100-Ga0075418_1000361915 ↗
Kingdom:: archaea

Quality

86.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-72

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3q7yA00	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.70	55.0	4.36e-01	84.1%	99.2%
6lf2B01	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.69	52.0	4.14e-01	81.0%	96.0%
3zx7A02	2.80.10.50	Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) ›	0.64	51.0	4.01e-01	88.9%	95.6%
1ab8A00	3.30.70.1230	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain	0.61	51.0	3.81e-01	98.4%	79.7%
2pvuA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.57	46.0	4.04e-01	92.1%	92.9%
4owpB00	3.40.140.10	Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2	0.53	43.0	3.37e-01	100.0%	66.3%
2zkmX01	2.30.29.240	Mainly Beta › Roll › PH-domain like ›	0.52	36.0	2.59e-01	73.0%	29.6%
2z04B03	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.52	36.0	2.63e-01	73.0%	35.5%
6aiiA00	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.52	37.0	2.44e-01	81.0%	37.3%
1rniA01	3.30.720.160	Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Bifunctional DNA primase/polymerase, N-terminal	0.52	38.0	3.77e-01	100.0%	77.1%
2x3lB03	3.90.105.10	Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › Molybdopterin biosynthesis moea protein, domain 2	0.51	35.0	3.58e-01	100.0%	76.3%
3kfvA01	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.51	42.0	3.70e-01	96.8%	98.0%
3qtgA03	3.40.1380.20	Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain	0.50	40.0	3.43e-01	95.2%	81.7%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3508549	375.10.1.2 ↗	few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE	0.62	33.0	3.85e-01	98.4%	73.3%
3172964	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.62	39.0	4.36e-01	74.6%	100.0%
3662600	3115.5.1.0 ↗	a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB	0.60	40.0	4.39e-01	77.8%	97.8%
3598574	2004.1.1.250 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd	0.59	49.0	3.08e-01	100.0%	30.6%
4939266	2002.1.1.52 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32	0.57	46.0	2.93e-01	92.1%	29.0%
3406228	11.1.1.179 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3	0.55	48.0	3.12e-01	100.0%	21.8%
3846096	2007.1.2.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor	0.53	40.0	2.88e-01	87.3%	72.9%
3972842	2.6.1.1 ↗	beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase	0.52	36.0	2.91e-01	74.6%	80.0%
1518134	7518.1.1.1 ↗	a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C	0.50	40.0	3.50e-01	95.2%	87.9%