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IMGVR_UViG_3300009100_000053-3300009100-Ga0075418_1000361917
Arc-VirIMGVR_UViG_3300009100_000053-3300009100-Ga0075418_1000361917
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-67
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pn5A09 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.84 | 65.0 | 4.08e-01 | 82.0% | 37.8% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 57.0 | 5.30e-01 | 90.2% | 87.0% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 54.0 | 5.31e-01 | 86.9% | 98.5% |
| 1quuA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 52.0 | 4.07e-01 | 83.6% | 72.2% |
| 1dd3A01 | 1.20.5.710 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.67 | 48.0 | 4.96e-01 | 77.0% | 89.5% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 46.0 | 3.52e-01 | 75.4% | 79.3% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.65 | 50.0 | 4.46e-01 | 82.0% | 94.2% |
| 3ih6E00 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.61 | 48.0 | 3.46e-01 | 86.9% | 87.4% |
| 2r6fA02 | 1.20.1580.10 | Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain | 0.60 | 48.0 | 3.62e-01 | 90.2% | 81.9% |
| 2pusA04 | 6.10.140.300 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 48.0 | 3.93e-01 | 86.9% | 54.6% |
| 4x5mA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.58 | 43.0 | 3.98e-01 | 85.2% | 84.9% |
| 2y0eB03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 41.0 | 2.88e-01 | 82.0% | 24.7% |
| 4xjvA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 42.0 | 2.99e-01 | 95.1% | 82.9% |
| 3qmvB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 2.98e-01 | 100.0% | 76.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3713494 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.85 | 58.0 | 5.67e-01 | 70.5% | 67.7% |
| 3656073 | 109.4.1.47 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Xpo1,CRM1_C,CRM1_repeat,CRM1_repeat_2,CRM1_repeat_3 | 0.77 | 70.0 | 3.80e-01 | 100.0% | 10.8% |
| 4879740 | 109.4.1.553 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Xpo1 | 0.77 | 69.0 | 4.86e-01 | 98.4% | 65.9% |
| 3355773 | 109.4.1.47 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Xpo1,CRM1_C,CRM1_repeat,CRM1_repeat_2,CRM1_repeat_3 | 0.77 | 70.0 | 3.80e-01 | 100.0% | 11.2% |
| 3488979 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.77 | 59.0 | 4.60e-01 | 82.0% | 68.8% |
| 4012040 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 68.0 | 3.70e-01 | 100.0% | 11.3% |
| 4863092 | 150.3.1.28 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › GCSF | 0.66 | 48.0 | 3.93e-01 | 77.0% | 99.1% |
| 3714197 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 57.0 | 3.89e-01 | 96.7% | 54.4% |
| 3634796 | 604.11.1.4 ↗ | alpha bundles › Spectrin repeat-like › XseB-like › XseB-like › zf-CCCH_6 | 0.65 | 50.0 | 4.65e-01 | 86.9% | 70.0% |
| 3337441 | 109.4.1.1143 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PEARLI-4 | 0.64 | 53.0 | 4.53e-01 | 91.8% | 88.0% |
| 3416802 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.62 | 51.0 | 4.93e-01 | 91.8% | 95.7% |
| 3339727 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.61 | 46.0 | 4.06e-01 | 83.6% | 94.7% |
| 3385552 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.61 | 47.0 | 4.24e-01 | 88.5% | 64.4% |
| None | — | 0.60 | 40.0 | 2.40e-01 | 70.5% | 9.1% | |
| 3712443 | 206.1.3.13 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSP_synth | 0.52 | 41.0 | 2.68e-01 | 90.2% | 54.0% |
| 4990927 | 10.28.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 | 0.52 | 40.0 | 3.29e-01 | 88.5% | 44.0% |