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IMGVR_UViG_3300009100_000053-3300009100-Ga0075418_1000361923
Arc-VirIMGVR_UViG_3300009100_000053-3300009100-Ga0075418_1000361923
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-154
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kzsA02 | 6.10.140.1870 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 43.0 | 5.40e-01 | 87.5% | 82.9% |
| 5ux1D00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.74 | 65.0 | 5.31e-01 | 93.8% | 61.4% |
| 2vzbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 63.0 | 5.44e-01 | 93.8% | 74.3% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.68 | 43.0 | 4.84e-01 | 89.3% | 82.6% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 43.0 | 4.63e-01 | 95.5% | 75.8% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 45.0 | 4.73e-01 | 82.1% | 77.0% |
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.65 | 48.0 | 4.24e-01 | 94.6% | 54.1% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 41.0 | 4.21e-01 | 91.1% | 66.0% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 41.0 | 4.90e-01 | 84.8% | 94.7% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 43.0 | 4.46e-01 | 91.1% | 72.6% |
| 5j1hA01 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 43.0 | 3.64e-01 | 91.1% | 42.3% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 42.0 | 4.92e-01 | 92.9% | 97.4% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 36.0 | 3.31e-01 | 91.1% | 43.7% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.61 | 39.0 | 4.54e-01 | 85.7% | 91.1% |
| 3lwjA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 38.0 | 3.18e-01 | 86.6% | 36.3% |
| 4hojA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 37.0 | 3.87e-01 | 94.6% | 64.1% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.60 | 50.0 | 4.59e-01 | 92.0% | 76.7% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.59 | 43.0 | 4.41e-01 | 91.1% | 77.3% |
| 1bdp002 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.58 | 48.0 | 4.86e-01 | 86.6% | 89.9% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.57 | 48.0 | 3.99e-01 | 97.3% | 53.1% |
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 43.0 | 4.54e-01 | 83.0% | 90.0% |
| 7xpcA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 47.0 | 3.40e-01 | 91.1% | 90.5% |
| 4mycA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.56 | 48.0 | 3.48e-01 | 93.8% | 54.0% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 44.0 | 4.47e-01 | 90.2% | 87.2% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.54 | 43.0 | 3.40e-01 | 84.8% | 43.7% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 41.0 | 4.03e-01 | 84.8% | 72.4% |
| 2lquA01 | 1.20.1420.40 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Decorin-binding protein | 0.54 | 41.0 | 3.68e-01 | 85.7% | 57.8% |
| 3ofnY00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.53 | 40.0 | 3.98e-01 | 88.4% | 77.4% |
| 4py6C00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 46.0 | 4.46e-01 | 99.1% | 98.4% |
| 1d9cA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 36.0 | 3.58e-01 | 73.2% | 69.4% |
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.51 | 40.0 | 3.98e-01 | 85.7% | 80.0% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.51 | 46.0 | 3.49e-01 | 100.0% | 70.5% |
| 1ykeD00 | 6.10.280.10 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator complex, subunit Med21 | 0.51 | 33.0 | 3.38e-01 | 80.4% | 65.5% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.51 | 35.0 | 3.25e-01 | 77.7% | 55.9% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.50 | 35.0 | 3.68e-01 | 100.0% | 77.7% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3898384 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.71 | 37.0 | 3.50e-01 | 87.5% | 42.3% |
| 3609099 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.71 | 44.0 | 4.87e-01 | 90.2% | 77.8% |
| 4980098 | 3834.1.1.0 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain | 0.68 | 43.0 | 3.19e-01 | 86.6% | 26.8% |
| 3612019 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 42.0 | 4.64e-01 | 92.0% | 78.9% |
| 3231234 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.66 | 45.0 | 4.31e-01 | 97.3% | 60.0% |
| 3632799 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.65 | 50.0 | 4.73e-01 | 100.0% | 67.4% |
| 3501427 | 3755.3.1.295 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WWC1 | 0.64 | 44.0 | 4.01e-01 | 92.0% | 53.8% |
| 3257797 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.64 | 38.0 | 2.95e-01 | 91.1% | 27.7% |
| 3473142 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.63 | 43.0 | 4.01e-01 | 88.4% | 56.4% |
| 3969942 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.63 | 43.0 | 4.31e-01 | 92.0% | 67.8% |
| 4014996 | 7094.1.1.0 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin | 0.62 | 48.0 | 5.11e-01 | 85.7% | 90.0% |
| 3260973 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 41.0 | 4.15e-01 | 88.4% | 69.1% |
| 4146694 | 192.29.1.277 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin | 0.61 | 35.0 | 4.38e-01 | 81.2% | 96.9% |
| 4992506 | 604.5.1.1 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div | 0.59 | 52.0 | 4.31e-01 | 96.4% | 96.0% |
| 3718498 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.59 | 35.0 | 3.81e-01 | 87.5% | 71.1% |
| 3897625 | 3755.4.1.71 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › WWC1 | 0.59 | 41.0 | 3.83e-01 | 87.5% | 58.5% |
| 3849769 | 3755.3.1.295 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WWC1 | 0.59 | 40.0 | 3.78e-01 | 88.4% | 57.8% |
| 4027540 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.58 | 35.0 | 3.14e-01 | 83.0% | 42.5% |
| 3538350 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.58 | 50.0 | 4.64e-01 | 90.2% | 78.5% |
| 3297061 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.58 | 40.0 | 3.96e-01 | 97.3% | 68.7% |
| 4936733 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.57 | 48.0 | 4.73e-01 | 90.2% | 85.8% |
| 3781013 | 3291.1.1.170 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › WWC1 | 0.57 | 40.0 | 3.78e-01 | 91.1% | 60.7% |
| 5013382 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.56 | 50.0 | 4.01e-01 | 94.6% | 59.5% |
| 4001186 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 44.0 | 3.66e-01 | 88.4% | 49.5% |
| None | — | 0.55 | 49.0 | 3.62e-01 | 100.0% | 48.6% | |
| 4977416 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 44.0 | 3.35e-01 | 88.4% | 39.3% |
| 4682501 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.54 | 41.0 | 4.34e-01 | 91.1% | 90.0% |
| 5080472 | 3834.1.1.0 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain | 0.54 | 44.0 | 2.80e-01 | 85.7% | 22.4% |
| 3294656 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.54 | 45.0 | 3.04e-01 | 88.4% | 26.7% |
| 4259224 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.53 | 42.0 | 3.72e-01 | 86.6% | 58.7% |
| 4184330 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.53 | 41.0 | 4.31e-01 | 91.1% | 90.0% |
| 3706526 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.53 | 42.0 | 3.78e-01 | 88.4% | 62.7% |
| 4435642 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.53 | 41.0 | 4.34e-01 | 92.0% | 94.0% |
| 3579748 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.52 | 44.0 | 3.79e-01 | 89.3% | 77.6% |
| 4998688 | 192.2.1.89 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF7121 | 0.52 | 44.0 | 3.31e-01 | 88.4% | 41.6% |
| 3227134 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.52 | 40.0 | 4.05e-01 | 80.4% | 100.0% |
| 5081955 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.52 | 45.0 | 3.35e-01 | 92.9% | 68.9% |
| 3631582 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.51 | 34.0 | 3.60e-01 | 96.4% | 77.0% |
| 3631949 | 309.1.2.5 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › Seryl_tRNA_N | 0.51 | 46.0 | 4.44e-01 | 98.2% | 96.8% |