←Back to structures
IMGVR_UViG_3300009121_000002-3300009121-Ga0118671_10002285
Arc-VirIMGVR_UViG_3300009121_000002-3300009121-Ga0118671_10002285
Identity
- Kingdom:
- archaea
Quality
81.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-46
Domain cluster:
representative
CATH (76)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.98 | 89.0 | 7.81e-01 | 97.4% | 70.4% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.97 | 90.0 | 7.34e-01 | 100.0% | 59.1% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.94 | 86.0 | 7.81e-01 | 100.0% | 76.5% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.94 | 84.0 | 8.01e-01 | 100.0% | 84.4% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.94 | 85.0 | 7.48e-01 | 100.0% | 70.9% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 79.0 | 6.96e-01 | 97.4% | 66.1% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 83.0 | 6.95e-01 | 100.0% | 65.1% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 80.0 | 7.19e-01 | 100.0% | 75.9% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 78.0 | 6.12e-01 | 97.4% | 48.8% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 78.0 | 6.47e-01 | 97.4% | 56.7% |
| 4jp0A03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.90 | 71.0 | 7.46e-01 | 89.7% | 100.0% |
| 1jhgA00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.90 | 78.0 | 5.75e-01 | 100.0% | 39.6% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 76.0 | 6.36e-01 | 97.4% | 58.2% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.89 | 77.0 | 6.89e-01 | 100.0% | 69.6% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.88 | 78.0 | 5.35e-01 | 100.0% | 32.5% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 75.0 | 6.13e-01 | 97.4% | 52.8% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 75.0 | 6.47e-01 | 97.4% | 65.6% |
| 3frwB00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.87 | 75.0 | 5.63e-01 | 100.0% | 40.6% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 73.0 | 5.91e-01 | 97.4% | 51.3% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 74.0 | 5.86e-01 | 97.4% | 50.0% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 73.0 | 5.93e-01 | 97.4% | 50.7% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 73.0 | 6.45e-01 | 97.4% | 67.2% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 76.0 | 7.50e-01 | 100.0% | 100.0% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 74.0 | 6.29e-01 | 97.4% | 60.3% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 74.0 | 6.48e-01 | 100.0% | 69.5% |
| 1j5yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 73.0 | 6.23e-01 | 100.0% | 65.6% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 72.0 | 6.55e-01 | 100.0% | 75.9% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.83 | 72.0 | 6.43e-01 | 100.0% | 73.2% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 70.0 | 5.43e-01 | 97.4% | 43.7% |
| 3c57B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 70.0 | 6.51e-01 | 97.4% | 77.6% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 69.0 | 5.91e-01 | 97.4% | 61.9% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 68.0 | 6.63e-01 | 100.0% | 90.9% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 67.0 | 6.08e-01 | 97.4% | 72.7% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 64.0 | 6.00e-01 | 92.3% | 76.0% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 64.0 | 4.98e-01 | 97.4% | 40.4% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.80 | 71.0 | 4.85e-01 | 100.0% | 29.8% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 69.0 | 5.92e-01 | 100.0% | 64.1% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 68.0 | 5.88e-01 | 100.0% | 65.1% |
| 4nvsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.80 | 65.0 | 4.35e-01 | 94.9% | 54.2% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 69.0 | 5.48e-01 | 100.0% | 56.4% |
| 3bddD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 66.0 | 4.62e-01 | 100.0% | 37.9% |
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 64.0 | 5.10e-01 | 100.0% | 49.4% |
| 2p8tA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 65.0 | 5.38e-01 | 100.0% | 52.0% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 66.0 | 5.61e-01 | 100.0% | 62.7% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 63.0 | 6.00e-01 | 100.0% | 82.0% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 4.98e-01 | 97.4% | 42.2% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 66.0 | 5.04e-01 | 97.4% | 42.7% |
| 1b9mB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 4.80e-01 | 97.4% | 38.4% |
| 4b8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 65.0 | 4.48e-01 | 100.0% | 30.0% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 62.0 | 4.34e-01 | 97.4% | 29.0% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 64.0 | 5.10e-01 | 100.0% | 51.2% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 63.0 | 4.89e-01 | 100.0% | 41.9% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 63.0 | 4.98e-01 | 100.0% | 46.0% |
| 3f2gA00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.75 | 66.0 | 4.13e-01 | 100.0% | 20.5% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 63.0 | 5.24e-01 | 97.4% | 58.6% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 65.0 | 5.32e-01 | 100.0% | 61.1% |
| 8amzO01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.74 | 61.0 | 3.60e-01 | 100.0% | 13.8% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 64.0 | 5.17e-01 | 100.0% | 50.0% |
| 4u7bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 61.0 | 6.18e-01 | 97.4% | 97.4% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 60.0 | 5.76e-01 | 92.3% | 97.8% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 62.0 | 5.16e-01 | 100.0% | 54.8% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 63.0 | 5.17e-01 | 100.0% | 68.0% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 57.0 | 5.03e-01 | 97.4% | 63.6% |
| 3cjdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.73 | 61.0 | 4.00e-01 | 100.0% | 26.9% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 59.0 | 4.58e-01 | 97.4% | 42.6% |
| 5cz2G00 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.71 | 56.0 | 5.61e-01 | 100.0% | 87.8% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 58.0 | 4.72e-01 | 100.0% | 48.1% |
| 4ev0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 57.0 | 4.77e-01 | 100.0% | 61.0% |
| 2hxoA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 57.0 | 5.06e-01 | 100.0% | 85.7% |
| 2nriB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 56.0 | 4.48e-01 | 100.0% | 51.1% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 58.0 | 4.71e-01 | 100.0% | 67.5% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.69 | 57.0 | 5.51e-01 | 100.0% | 87.0% |
| 2v9kA01 | 1.10.10.2050 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.68 | 60.0 | 5.56e-01 | 100.0% | 98.0% |
| 2oi8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 56.0 | 3.64e-01 | 100.0% | 26.6% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 56.0 | 3.63e-01 | 100.0% | 25.7% |
| 4bxoA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.58 | 49.0 | 4.20e-01 | 100.0% | 64.2% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3210747 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 1.00 | 94.0 | 8.86e-01 | 100.0% | 86.7% |
| 5061884 | 101.1.2.887 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF1670 | 0.98 | 91.0 | 5.79e-01 | 100.0% | 24.4% |
| 3693390 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.98 | 91.0 | 7.70e-01 | 100.0% | 65.0% |
| 3505559 | 101.1.6.19 ↗ | alpha arrays › HTH › HTH › TrpR › PAX | 0.98 | 91.0 | 7.11e-01 | 100.0% | 52.0% |
| 4929382 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.98 | 91.0 | 7.96e-01 | 100.0% | 70.9% |
| 3789627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.98 | 91.0 | 7.47e-01 | 100.0% | 60.0% |
| 4054648 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.98 | 91.0 | 7.95e-01 | 100.0% | 70.9% |
| 4987653 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.98 | 91.0 | 8.62e-01 | 100.0% | 88.9% |
| 3477795 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.98 | 86.0 | 8.18e-01 | 94.9% | 82.2% |
| 4162857 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.98 | 91.0 | 8.22e-01 | 100.0% | 78.0% |
| 4060647 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.98 | 91.0 | 7.45e-01 | 100.0% | 61.5% |
| 3589359 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.98 | 88.0 | 8.78e-01 | 97.4% | 95.0% |
| 4927434 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.97 | 90.0 | 8.55e-01 | 100.0% | 86.7% |
| 4952807 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.97 | 90.0 | 7.02e-01 | 100.0% | 52.0% |
| 5020331 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.97 | 89.0 | 7.36e-01 | 100.0% | 60.0% |
| 3879118 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.97 | 89.0 | 7.82e-01 | 100.0% | 70.9% |
| 4198219 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.96 | 89.0 | 8.45e-01 | 100.0% | 86.7% |
| 4334657 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.96 | 89.0 | 8.43e-01 | 100.0% | 86.7% |
| 5018585 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.96 | 89.0 | 7.79e-01 | 100.0% | 72.7% |
| 3234222 | 101.1.1.54 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_1 | 0.96 | 88.0 | 7.72e-01 | 100.0% | 70.9% |
| 5028266 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.96 | 88.0 | 7.51e-01 | 100.0% | 66.1% |
| 3946793 | 101.1.1.259 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 | 0.96 | 86.0 | 5.93e-01 | 97.4% | 33.0% |
| 5002577 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.96 | 87.0 | 5.97e-01 | 100.0% | 33.3% |
| 4973199 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.95 | 87.0 | 7.40e-01 | 100.0% | 65.0% |
| 4970998 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.95 | 88.0 | 6.30e-01 | 100.0% | 41.0% |
| 3589152 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.95 | 86.0 | 8.24e-01 | 100.0% | 86.7% |
| 4979402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.95 | 87.0 | 7.39e-01 | 100.0% | 65.0% |
| 5077769 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.95 | 86.0 | 7.90e-01 | 100.0% | 78.0% |
| 5014141 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.95 | 86.0 | 7.85e-01 | 100.0% | 80.0% |
| 3922450 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.95 | 86.0 | 8.54e-01 | 100.0% | 97.5% |
| 3589184 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.94 | 85.0 | 6.74e-01 | 100.0% | 52.0% |
| 4969699 | 101.1.6.40 ↗ | alpha arrays › HTH › HTH › TrpR › DUF1670 | 0.94 | 86.0 | 6.61e-01 | 100.0% | 48.8% |
| 3989075 | 101.1.3.11 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 | 0.94 | 83.0 | 8.38e-01 | 97.4% | 100.0% |
| 5063318 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.94 | 84.0 | 7.46e-01 | 100.0% | 70.9% |
| 1159643 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.94 | 85.0 | 6.82e-01 | 100.0% | 54.9% |
| 5043001 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.94 | 82.0 | 5.88e-01 | 97.4% | 36.2% |
| 4952035 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.93 | 84.0 | 7.19e-01 | 100.0% | 65.0% |
| 4031116 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 84.0 | 7.17e-01 | 100.0% | 65.0% |
| 3232498 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 83.0 | 6.76e-01 | 100.0% | 55.7% |
| 3278040 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 83.0 | 7.16e-01 | 100.0% | 66.7% |
| 3988145 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.93 | 85.0 | 7.73e-01 | 100.0% | 78.0% |
| 3587644 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.93 | 83.0 | 7.16e-01 | 100.0% | 65.0% |
| 3942514 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.93 | 86.0 | 7.84e-01 | 100.0% | 78.0% |
| 4976345 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.93 | 84.0 | 7.16e-01 | 100.0% | 66.7% |
| 4990647 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 83.0 | 7.36e-01 | 100.0% | 72.7% |
| 5043241 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 85.0 | 8.43e-01 | 100.0% | 100.0% |
| 4943227 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.93 | 83.0 | 7.93e-01 | 100.0% | 86.7% |
| 5017723 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 83.0 | 6.60e-01 | 100.0% | 53.3% |
| 4002905 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 83.0 | 6.93e-01 | 100.0% | 60.0% |
| 4143289 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.93 | 82.0 | 7.33e-01 | 100.0% | 70.9% |
| 4952294 | 101.1.2.870 ↗ | alpha arrays › HTH › HTH › winged helix domain › GerE | 0.92 | 83.0 | 7.37e-01 | 100.0% | 70.9% |
| 5006645 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.92 | 82.0 | 7.04e-01 | 100.0% | 65.0% |
| 3904156 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 81.0 | 7.78e-01 | 100.0% | 86.7% |
| 3997733 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 82.0 | 6.86e-01 | 100.0% | 60.0% |
| 3925603 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 82.0 | 7.55e-01 | 100.0% | 78.0% |
| 3283589 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.92 | 82.0 | 7.52e-01 | 100.0% | 80.0% |
| 5004841 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 81.0 | 6.78e-01 | 100.0% | 60.0% |
| 4994121 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 83.0 | 8.25e-01 | 100.0% | 97.5% |
| 5003692 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.91 | 80.0 | 6.75e-01 | 100.0% | 60.0% |
| 3753093 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.91 | 80.0 | 6.73e-01 | 100.0% | 60.0% |
| 4031756 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.91 | 79.0 | 6.05e-01 | 97.4% | 44.7% |
| 3411416 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 80.0 | 7.71e-01 | 100.0% | 88.6% |
| 3988724 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 80.0 | 6.92e-01 | 100.0% | 66.7% |
| 5030781 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 83.0 | 8.26e-01 | 100.0% | 97.5% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.91 | 79.0 | 4.99e-01 | 97.4% | 21.1% |
| 4008322 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.90 | 80.0 | 7.11e-01 | 100.0% | 70.9% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 77.0 | 6.70e-01 | 97.4% | 63.3% |
| 5024511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 79.0 | 7.33e-01 | 100.0% | 78.0% |
| 3590732 | 101.1.1.364 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 | 0.90 | 80.0 | 7.64e-01 | 100.0% | 86.7% |
| 5020571 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.90 | 80.0 | 5.76e-01 | 100.0% | 37.1% |
| 3933366 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.90 | 78.0 | 6.37e-01 | 100.0% | 54.3% |
| 3932988 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 78.0 | 7.00e-01 | 100.0% | 70.9% |
| 4008959 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 79.0 | 7.05e-01 | 100.0% | 70.9% |
| 5060990 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.90 | 78.0 | 4.63e-01 | 100.0% | 14.3% |
| 4992594 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 78.0 | 7.49e-01 | 100.0% | 86.7% |
| 3243649 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.89 | 78.0 | 5.90e-01 | 100.0% | 44.4% |
| 3597464 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 78.0 | 6.73e-01 | 100.0% | 70.0% |
| 5071227 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.88 | 77.0 | 4.49e-01 | 100.0% | 13.0% |
| 4952293 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.87 | 76.0 | 7.55e-01 | 100.0% | 97.5% |
| 3962903 | 101.1.2.486 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_58 | 0.87 | 75.0 | 7.51e-01 | 100.0% | 97.5% |
| 3632861 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 76.0 | 7.28e-01 | 100.0% | 86.7% |
| 3946608 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.87 | 73.0 | 6.07e-01 | 97.4% | 55.7% |
| 4262428 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.87 | 74.0 | 4.34e-01 | 100.0% | 12.9% |
| 3976103 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 72.0 | 6.13e-01 | 97.4% | 60.0% |
| 5030780 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.85 | 71.0 | 6.72e-01 | 100.0% | 78.0% |
| 5038587 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.85 | 73.0 | 6.37e-01 | 100.0% | 65.0% |
| 5007028 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.84 | 72.0 | 6.52e-01 | 100.0% | 70.9% |
| 4958468 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.84 | 72.0 | 6.29e-01 | 100.0% | 65.0% |
| 3971636 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.83 | 72.0 | 7.20e-01 | 100.0% | 97.5% |
| 3783362 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.83 | 69.0 | 3.80e-01 | 100.0% | 6.1% |
| 4133453 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 69.0 | 6.30e-01 | 100.0% | 72.7% |
| 3391053 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 67.0 | 6.51e-01 | 100.0% | 86.7% |
| 3287232 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 70.0 | 5.69e-01 | 100.0% | 57.3% |
| 5002651 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.81 | 67.0 | 5.18e-01 | 100.0% | 43.2% |
| 5051680 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.79 | 66.0 | 5.37e-01 | 100.0% | 50.0% |
| 3410877 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 64.0 | 5.45e-01 | 100.0% | 57.1% |
| 4944329 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 65.0 | 6.08e-01 | 100.0% | 78.0% |
| 5060354 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 63.0 | 5.47e-01 | 100.0% | 60.0% |
D2
high
residues 61-111
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 57.0 | 4.97e-01 | 98.0% | 80.5% |
| 1nklA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.67 | 52.0 | 4.64e-01 | 90.2% | 71.8% |
| 3ol4A02 | 1.10.10.2390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 53.0 | 5.13e-01 | 92.2% | 88.3% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 52.0 | 4.59e-01 | 100.0% | 73.8% |
| 1ohcA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.63 | 50.0 | 3.69e-01 | 100.0% | 46.2% |
| 3rlbA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.61 | 53.0 | 3.68e-01 | 100.0% | 76.1% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 44.0 | 3.87e-01 | 100.0% | 59.0% |
| 3p01A01 | 6.10.140.590 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 48.0 | 4.06e-01 | 98.0% | 74.7% |
| 3iu0A00 | 3.90.1360.10 | Alpha Beta › Alpha-Beta Complex › Microbial transglutaminase. Chain: a › Protein-glutamine gamma-glutamyltransferase | 0.54 | 42.0 | 2.65e-01 | 98.0% | 15.8% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 45.0 | 4.23e-01 | 94.1% | 83.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3992442 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.76 | 62.0 | 5.34e-01 | 94.1% | 60.0% |
| 5046227 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 58.0 | 5.00e-01 | 92.2% | 64.7% |
| 5061536 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.70 | 56.0 | 4.56e-01 | 92.2% | 50.5% |
| 4588402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 56.0 | 5.01e-01 | 92.2% | 76.0% |
| 5010870 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.68 | 57.0 | 5.11e-01 | 98.0% | 81.3% |
| 3462112 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.65 | 52.0 | 4.61e-01 | 98.0% | 69.4% |
| 4353450 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.64 | 47.0 | 2.82e-01 | 80.4% | 28.5% |
| 4972648 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.60 | 52.0 | 3.29e-01 | 100.0% | 20.7% |
| 1503553 | 3796.1.1.1 ↗ | alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Isd_H_B_linker | 0.55 | 44.0 | 3.87e-01 | 100.0% | 59.0% |