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IMGVR_UViG_3300009121_000012-3300009121-Ga0118671_100140315
Arc-VirIMGVR_UViG_3300009121_000012-3300009121-Ga0118671_100140315
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-123
Domain cluster:
rep: JN051154.1__AER59760.1__clP1_001__00001__D30-123
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y3mA02 | 3.30.1370.130 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 28.0 | 3.79e-01 | 81.4% | 91.1% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.58 | 50.0 | 3.76e-01 | 99.2% | 91.5% |
| 2w86A03 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.56 | 22.0 | 3.30e-01 | 76.3% | 95.2% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 42.0 | 3.02e-01 | 81.4% | 92.2% |
| 4zudA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 41.0 | 3.23e-01 | 81.4% | 98.8% |
| 6nifA01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.52 | 42.0 | 3.49e-01 | 86.4% | 87.7% |
| 2innB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.52 | 46.0 | 3.08e-01 | 100.0% | 79.9% |
| 2g80A02 | 1.10.720.60 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.52 | 34.0 | 3.90e-01 | 85.6% | 98.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3672413 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 34.0 | 3.88e-01 | 86.4% | 67.8% |
| 3576188 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.62 | 23.0 | 2.67e-01 | 85.6% | 43.3% |
| 3516325 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 28.0 | 3.26e-01 | 93.2% | 66.3% |
| 4932485 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.53 | 27.0 | 3.57e-01 | 77.1% | 100.0% |
| 5000985 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.53 | 45.0 | 3.87e-01 | 94.1% | 64.1% |
| 3923908 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.53 | 44.0 | 3.43e-01 | 93.2% | 66.5% |
| 5069558 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 22.0 | 3.26e-01 | 86.4% | 97.8% |
| 4995244 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 37.0 | 3.88e-01 | 100.0% | 80.0% |
| 5001620 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.52 | 36.0 | 3.84e-01 | 72.9% | 100.0% |
| 4025452 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.52 | 37.0 | 3.78e-01 | 100.0% | 76.5% |
| 3781952 | 101.1.2.45 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP | 0.52 | 31.0 | 3.28e-01 | 100.0% | 65.7% |
| 3171118 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.51 | 42.0 | 3.51e-01 | 91.5% | 82.3% |