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IMGVR_UViG_3300009285_014935-3300009285-Ga0103680_100248224
Arc-VirIMGVR_UViG_3300009285_014935-3300009285-Ga0103680_100248224
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 118-209
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 32.0 | 3.42e-01 | 81.5% | 59.5% |
| 1nh2C00 | 2.30.18.10 | Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain | 0.58 | 27.0 | 3.58e-01 | 75.0% | 82.0% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 43.0 | 2.82e-01 | 88.0% | 32.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004308 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 67.0 | 5.48e-01 | 92.4% | 57.4% |
| 4032554 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.75 | 64.0 | 5.17e-01 | 97.8% | 50.3% |
| 3589778 | 1.1.5.78 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_TTP_1 | 0.68 | 60.0 | 4.89e-01 | 96.7% | 51.8% |
| 4030848 | 1.1.13.52 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_1 | 0.67 | 59.0 | 4.85e-01 | 96.7% | 55.8% |
| 3331706 | 222.1.1.5 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FabA | 0.65 | 29.0 | 3.18e-01 | 73.9% | 47.4% |
| 2101663 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.65 | 52.0 | 4.22e-01 | 83.7% | 52.8% |
| 3800832 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.60 | 29.0 | 3.30e-01 | 76.1% | 58.6% |
| 3990341 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 30.0 | 2.93e-01 | 79.3% | 41.9% |
| 4830163 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.56 | 31.0 | 2.57e-01 | 82.6% | 27.8% |
| 3186200 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 31.0 | 3.26e-01 | 78.3% | 67.1% |
| 3894561 | 221.1.2.16 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › MTRES1_C | 0.50 | 29.0 | 2.89e-01 | 76.1% | 51.0% |