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IMGVR_UViG_3300009360_000161-3300009360-Ga0118672_100139611
Arc-VirIMGVR_UViG_3300009360_000161-3300009360-Ga0118672_100139611
Identity
- Kingdom:
- archaea
Quality
80.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 314-428
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e6hA00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 39.0 | 2.53e-01 | 73.0% | 13.0% |
| 2np3A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 41.0 | 3.89e-01 | 74.8% | 81.7% |
| 4jmjA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 43.0 | 3.76e-01 | 92.2% | 91.7% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 39.0 | 3.43e-01 | 79.1% | 80.0% |
| 3p26A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 3.02e-01 | 75.7% | 82.0% |
| 1r1dA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 35.0 | 2.84e-01 | 73.0% | 98.8% |
| 2c2uA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 40.0 | 3.52e-01 | 87.0% | 83.1% |
| 2yw6B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 40.0 | 3.69e-01 | 86.1% | 92.0% |
| 4ki9A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 35.0 | 3.18e-01 | 71.3% | 70.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081313 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.76 | 57.0 | 6.35e-01 | 87.0% | 100.0% |
| 4978272 | 182.1.3.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg | 0.74 | 64.0 | 6.49e-01 | 100.0% | 93.0% |
| 5064030 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.73 | 56.0 | 6.04e-01 | 87.8% | 96.8% |
| 5043574 | 182.1.3.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg | 0.72 | 63.0 | 6.17e-01 | 100.0% | 86.4% |
| 4071151 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.64 | 46.0 | 4.42e-01 | 73.9% | 83.8% |
| 5057633 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.62 | 44.0 | 4.45e-01 | 73.9% | 88.7% |
| 3497896 | 109.3.1.204 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Death_MADD | 0.61 | 46.0 | 3.51e-01 | 78.3% | 67.3% |
| 3595619 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 40.0 | 3.97e-01 | 97.4% | 75.8% |
| 3272819 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.53 | 41.0 | 4.18e-01 | 83.5% | 89.1% |
D2
high
residues 445-457_797-863
Domain cluster:
rep: ON526969.1__USH44525.1__SEA_CASSITA_70__00070__D751-814
D3
high
residues 950-1013
Domain cluster:
representative
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 5.95e-01 | 100.0% | 80.8% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 61.0 | 4.82e-01 | 100.0% | 42.8% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 6.01e-01 | 100.0% | 83.3% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 67.0 | 6.42e-01 | 100.0% | 87.7% |
| 3lmmB05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 62.0 | 6.37e-01 | 98.4% | 98.4% |
| 1xo0A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.72 | 63.0 | 5.18e-01 | 95.3% | 64.9% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.72 | 62.0 | 5.79e-01 | 100.0% | 91.4% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 61.0 | 5.30e-01 | 100.0% | 73.8% |
| 3ol4A02 | 1.10.10.2390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.70 | 59.0 | 6.06e-01 | 95.3% | 98.3% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 61.0 | 6.04e-01 | 100.0% | 95.7% |
| 3dpuA03 | 1.10.10.2200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 60.0 | 5.73e-01 | 100.0% | 89.3% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.69 | 48.0 | 4.87e-01 | 71.9% | 88.7% |
| 5deqB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 58.0 | 5.38e-01 | 95.3% | 79.5% |
| 2ixsA01 | 1.10.10.1820 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BsuBI/PstI restriction endonuclease, N-terminal domain | 0.69 | 58.0 | 4.49e-01 | 100.0% | 59.0% |
| 3broD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 59.0 | 4.69e-01 | 100.0% | 52.2% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 5.25e-01 | 100.0% | 81.4% |
| 4etsA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 5.21e-01 | 100.0% | 86.2% |
| 1bh9B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 45.0 | 3.98e-01 | 70.3% | 66.3% |
| 2ly1A03 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.66 | 56.0 | 5.27e-01 | 100.0% | 82.7% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 55.0 | 4.68e-01 | 100.0% | 86.0% |
| 1wfxA01 | 1.10.10.970 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain | 0.64 | 54.0 | 5.31e-01 | 100.0% | 98.6% |
| 1d3yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 53.0 | 5.22e-01 | 100.0% | 88.7% |
| 3frqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 45.0 | 3.29e-01 | 100.0% | 27.2% |
| 1txuA02 | 1.20.1050.80 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › VPS9 domain | 0.61 | 51.0 | 3.85e-01 | 93.8% | 66.9% |
| 3dv9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 52.0 | 5.08e-01 | 96.9% | 88.6% |
| 5zorA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 49.0 | 4.73e-01 | 100.0% | 82.2% |
| 1wtyA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.59 | 43.0 | 3.69e-01 | 82.8% | 49.1% |
| 4a8eA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.59 | 48.0 | 4.45e-01 | 95.3% | 71.3% |
| 2imgA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 44.0 | 3.44e-01 | 84.4% | 52.3% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 36.0 | 3.85e-01 | 79.7% | 75.0% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 49.0 | 4.79e-01 | 96.9% | 88.4% |
| 2f33A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.58 | 49.0 | 4.51e-01 | 100.0% | 88.5% |
| 2kifA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 4.10e-01 | 93.8% | 89.2% |
| 4p63D00 | 3.40.910.10 | Alpha Beta › 3-Layer(aba) Sandwich › Deoxyhypusine Synthase › Deoxyhypusine synthase | 0.57 | 49.0 | 3.18e-01 | 100.0% | 26.3% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.57 | 41.0 | 3.66e-01 | 98.4% | 52.1% |
| 2m3aA00 | 1.10.10.1900 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like | 0.57 | 44.0 | 4.41e-01 | 89.1% | 85.1% |
| 2hszA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 48.0 | 4.62e-01 | 96.9% | 88.0% |
| 7jv7B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 47.0 | 3.71e-01 | 100.0% | 42.5% |
| 2h92A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 46.0 | 3.21e-01 | 92.2% | 83.3% |
| 3e3rB01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 47.0 | 4.33e-01 | 98.4% | 87.1% |
| 4jd9G00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.55 | 42.0 | 3.52e-01 | 85.9% | 55.0% |
| 1q1vA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 43.0 | 4.24e-01 | 100.0% | 82.9% |
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.55 | 39.0 | 3.87e-01 | 100.0% | 71.6% |
| 1vquA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.55 | 39.0 | 3.88e-01 | 100.0% | 73.1% |
| 3bqoA00 | 1.25.40.210 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain | 0.54 | 43.0 | 3.14e-01 | 92.2% | 31.7% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 4.08e-01 | 84.4% | 94.6% |
| 3c1dA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 36.0 | 4.11e-01 | 100.0% | 100.0% |
| 3fwbA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 47.0 | 4.39e-01 | 100.0% | 84.1% |
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 4.28e-01 | 85.9% | 100.0% |
| 2btdA00 | 1.25.40.340 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain | 0.53 | 43.0 | 3.06e-01 | 90.6% | 82.3% |
| 1uouA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.53 | 39.0 | 3.92e-01 | 100.0% | 75.0% |
| 2vqgA00 | 1.10.10.1280 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Alpha-helical porin B/porin C | 0.53 | 42.0 | 4.06e-01 | 95.3% | 96.1% |
| 4eekA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 38.0 | 3.78e-01 | 81.2% | 93.9% |
| 3pdiA02 | 3.40.50.12380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase MoFe cofactor biosynthesis protein NifE, C-terminal | 0.52 | 40.0 | 2.73e-01 | 87.5% | 84.2% |
| 3tdoA00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.51 | 42.0 | 2.90e-01 | 96.9% | 40.5% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 40.0 | 4.05e-01 | 100.0% | 85.7% |
| 6vqqA01 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.51 | 42.0 | 2.85e-01 | 96.9% | 39.4% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5009770 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.79 | 71.0 | 6.59e-01 | 100.0% | 87.5% |
| 4992586 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.79 | 63.0 | 6.32e-01 | 89.1% | 86.2% |
| 5057164 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 66.0 | 5.76e-01 | 100.0% | 73.0% |
| 3472278 | 101.1.2.206 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH | 0.75 | 65.0 | 6.25e-01 | 100.0% | 89.3% |
| 3466949 | 101.1.2.524 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7625 | 0.74 | 65.0 | 5.41e-01 | 100.0% | 59.1% |
| 3490008 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 63.0 | 6.34e-01 | 96.9% | 100.0% |
| 5031078 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.74 | 62.0 | 5.39e-01 | 95.3% | 64.0% |
| 5074949 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 64.0 | 5.74e-01 | 98.4% | 70.0% |
| 3554511 | 101.1.2.206 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH | 0.74 | 64.0 | 6.02e-01 | 100.0% | 88.7% |
| 4956461 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 5.89e-01 | 100.0% | 83.1% |
| None | — | 0.73 | 65.0 | 6.03e-01 | 100.0% | 91.3% | |
| 3593172 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 5.83e-01 | 100.0% | 78.8% |
| 3505603 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 64.0 | 6.01e-01 | 100.0% | 83.7% |
| 4981596 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 64.0 | 6.23e-01 | 100.0% | 92.9% |
| 3264367 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 65.0 | 5.59e-01 | 100.0% | 65.0% |
| 5056734 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 5.29e-01 | 100.0% | 63.5% |
| 3489856 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 5.94e-01 | 100.0% | 85.0% |
| 3613393 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 5.92e-01 | 100.0% | 83.7% |
| 3938065 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 6.01e-01 | 100.0% | 97.3% |
| 5030252 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 61.0 | 5.39e-01 | 100.0% | 71.0% |
| 4983812 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.71 | 62.0 | 5.69e-01 | 100.0% | 80.0% |
| 3929910 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.71 | 61.0 | 4.68e-01 | 100.0% | 43.9% |
| 5028866 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 59.0 | 5.16e-01 | 95.3% | 61.0% |
| 5049282 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 61.0 | 5.65e-01 | 100.0% | 81.2% |
| 3971509 | 101.1.2.851 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27731 | 0.71 | 62.0 | 5.57e-01 | 100.0% | 73.3% |
| 3942501 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 60.0 | 5.44e-01 | 100.0% | 83.3% |
| 4022486 | 101.1.2.374 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD | 0.70 | 60.0 | 5.48e-01 | 100.0% | 81.1% |
| 4944051 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 59.0 | 4.49e-01 | 100.0% | 42.9% |
| 4994650 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 53.0 | 5.56e-01 | 89.1% | 96.4% |
| 4955128 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.70 | 60.0 | 4.72e-01 | 100.0% | 45.8% |
| 5062912 | 101.1.2.894 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2240 | 0.70 | 59.0 | 5.46e-01 | 100.0% | 72.9% |
| 3583002 | 101.1.2.265 ↗ | alpha arrays › HTH › HTH › winged helix domain › Stork_head | 0.70 | 60.0 | 5.86e-01 | 100.0% | 95.7% |
| 5010870 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.70 | 61.0 | 5.81e-01 | 100.0% | 86.7% |
| 4009179 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 60.0 | 5.42e-01 | 100.0% | 78.9% |
| 4304583 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 59.0 | 5.91e-01 | 100.0% | 100.0% |
| 4009124 | 639.2.1.5 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › PF27475 | 0.69 | 48.0 | 5.02e-01 | 73.4% | 90.0% |
| 3595754 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.69 | 59.0 | 5.46e-01 | 100.0% | 77.6% |
| 5053119 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 58.0 | 4.85e-01 | 100.0% | 55.8% |
| 5031662 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 58.0 | 4.73e-01 | 98.4% | 56.0% |
| 3469846 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.68 | 53.0 | 5.17e-01 | 84.4% | 81.4% |
| 5002376 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 55.0 | 4.79e-01 | 98.4% | 57.1% |
| 5011846 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 58.0 | 5.66e-01 | 100.0% | 91.4% |
| 4028797 | 1091.1.1.1 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › Ribosomal_60s | 0.67 | 50.0 | 5.04e-01 | 100.0% | 80.0% |
| 5048461 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 57.0 | 5.31e-01 | 100.0% | 85.9% |
| 3608869 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 57.0 | 5.01e-01 | 100.0% | 84.0% |
| 5011499 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 54.0 | 5.39e-01 | 93.8% | 93.8% |
| 3711005 | 1091.1.1.0 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 | 0.65 | 50.0 | 5.19e-01 | 100.0% | 90.0% |
| 4028933 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 56.0 | 5.46e-01 | 100.0% | 94.3% |
| 4426661 | 1091.1.1.1 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › Ribosomal_60s | 0.65 | 51.0 | 5.08e-01 | 100.0% | 84.6% |
| 5001110 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.65 | 53.0 | 3.65e-01 | 92.2% | 55.7% |
| 5065772 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.64 | 53.0 | 3.64e-01 | 93.8% | 54.9% |
| 3274011 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 52.0 | 5.27e-01 | 96.9% | 95.4% |
| 2448205 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 55.0 | 4.03e-01 | 100.0% | 57.6% |
| 3283922 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.61 | 53.0 | 5.17e-01 | 100.0% | 91.4% |
| 3879519 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.61 | 53.0 | 4.99e-01 | 98.4% | 82.3% |
| 2523964 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.61 | 54.0 | 4.49e-01 | 100.0% | 84.7% |
| 3828011 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.61 | 43.0 | 3.12e-01 | 96.9% | 25.9% |
| 3414650 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.61 | 52.0 | 4.13e-01 | 100.0% | 73.6% |
| 3479146 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 52.0 | 3.87e-01 | 100.0% | 58.9% |
| 3266019 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.60 | 52.0 | 3.96e-01 | 100.0% | 63.7% |
| 3459581 | 108.1.1.104 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_8 | 0.60 | 52.0 | 3.85e-01 | 100.0% | 58.3% |
| 4096325 | 108.1.1.104 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_8 | 0.60 | 52.0 | 3.25e-01 | 100.0% | 27.3% |
| 3882993 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.60 | 51.0 | 4.00e-01 | 100.0% | 67.3% |
| 3904828 | 108.1.1.74 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7+EF-hand_8 | 0.60 | 51.0 | 3.31e-01 | 100.0% | 30.6% |
| 3845326 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.60 | 51.0 | 3.29e-01 | 100.0% | 29.7% |
| 3531626 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.60 | 52.0 | 3.66e-01 | 100.0% | 46.7% |
| 3719415 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.59 | 49.0 | 3.85e-01 | 100.0% | 41.4% |
| 4971005 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.59 | 47.0 | 3.23e-01 | 89.1% | 56.3% |
| 4602708 | 108.1.1.104 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_8 | 0.59 | 51.0 | 3.21e-01 | 100.0% | 27.4% |
| 5040698 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.59 | 45.0 | 4.62e-01 | 100.0% | 93.3% |
| 2649440 | 108.1.1.1 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 | 0.59 | 50.0 | 3.81e-01 | 100.0% | 62.4% |
| 3390873 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.59 | 51.0 | 3.22e-01 | 100.0% | 29.0% |
| 3928101 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.58 | 49.0 | 3.74e-01 | 100.0% | 61.2% |
| 3877946 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.57 | 49.0 | 3.19e-01 | 100.0% | 30.5% |
| 3919431 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.57 | 49.0 | 3.18e-01 | 100.0% | 29.8% |
| 3364559 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.56 | 44.0 | 3.52e-01 | 95.3% | 43.2% |
| 3943035 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.55 | 44.0 | 4.45e-01 | 100.0% | 87.7% |
| 3343561 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.55 | 43.0 | 3.28e-01 | 95.3% | 35.5% |
| 3660508 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.54 | 42.0 | 3.26e-01 | 95.3% | 36.7% |
| 3824693 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.54 | 43.0 | 2.92e-01 | 89.1% | 23.3% |
| 3596872 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 45.0 | 3.50e-01 | 100.0% | 41.2% |
| 1269705 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.53 | 39.0 | 3.80e-01 | 100.0% | 70.4% |
| 3646021 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.53 | 43.0 | 2.72e-01 | 95.3% | 16.1% |
| 4196863 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.53 | 38.0 | 3.75e-01 | 100.0% | 70.0% |
| 4484053 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.52 | 37.0 | 3.59e-01 | 100.0% | 65.3% |
| 3681327 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.52 | 40.0 | 3.44e-01 | 95.3% | 50.9% |
| 277273 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.51 | 36.0 | 3.54e-01 | 98.4% | 69.0% |
D4
medium
residues 1-104
Domain cluster:
rep: IMGVR_UViG_2645727699_000001-2645727699-2646596620__D7-108
D5
medium
residues 105-299
Domain cluster:
rep: IMGVR_UViG_3300035528_000047-3300035528-Ga0376490_000042_1500_4262__D55-202
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g71A01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.76 | 50.0 | 4.69e-01 | 77.4% | 55.5% |
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.75 | 62.0 | 4.88e-01 | 86.2% | 74.8% |
| 5t0oA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.70 | 37.0 | 5.02e-01 | 70.8% | 97.1% |
| 3jtnB00 | 3.30.70.1950 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 33.0 | 4.83e-01 | 71.8% | 98.9% |
| 4mt1A02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.69 | 37.0 | 4.96e-01 | 70.3% | 98.1% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.69 | 37.0 | 4.49e-01 | 85.1% | 77.9% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.58 | 47.0 | 4.40e-01 | 84.1% | 96.2% |
| 1gpjA01 | 3.30.460.30 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain | 0.58 | 37.0 | 4.17e-01 | 86.2% | 83.4% |
| 1tuaA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 29.0 | 3.79e-01 | 95.4% | 86.7% |
| 5yjlB01 | 3.30.460.30 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain | 0.57 | 40.0 | 4.29e-01 | 88.2% | 83.2% |
| 4kgmA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.57 | 47.0 | 4.45e-01 | 86.2% | 89.6% |
| 3otdA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.55 | 45.0 | 4.25e-01 | 86.7% | 90.4% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.55 | 28.0 | 3.77e-01 | 87.7% | 97.9% |
| 1zr6A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.55 | 38.0 | 3.75e-01 | 88.7% | 66.5% |
| 4clfA02 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 40.0 | 4.12e-01 | 99.0% | 83.2% |
| 5oyhD00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 40.0 | 4.16e-01 | 99.0% | 84.3% |
| 1wc1C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 41.0 | 4.19e-01 | 99.0% | 85.4% |
| 3gqcC01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 34.0 | 3.96e-01 | 84.6% | 94.9% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955551 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.86 | 71.0 | 6.45e-01 | 93.3% | 66.9% |
| 5026687 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.84 | 74.0 | 6.43e-01 | 99.0% | 64.0% |
| 4983703 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.84 | 73.0 | 6.50e-01 | 98.5% | 66.0% |
| 4984518 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.84 | 71.0 | 6.28e-01 | 95.4% | 63.3% |
| 4962169 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.82 | 53.0 | 4.95e-01 | 77.4% | 54.7% |
| 4942021 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.80 | 72.0 | 6.29e-01 | 97.9% | 66.5% |
| 5037338 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.80 | 70.0 | 6.21e-01 | 94.4% | 67.2% |
| 4937156 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.78 | 73.0 | 6.32e-01 | 97.9% | 68.6% |
| 5058297 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.78 | 69.0 | 6.01e-01 | 92.8% | 69.6% |
| 5030283 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.77 | 70.0 | 6.15e-01 | 97.9% | 67.6% |
| 5004945 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.77 | 54.0 | 4.85e-01 | 77.4% | 54.1% |
| 4989296 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.76 | 63.0 | 5.38e-01 | 84.6% | 61.7% |
| 4650634 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.76 | 54.0 | 4.87e-01 | 77.4% | 56.0% |
| 3518002 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.75 | 63.0 | 5.21e-01 | 86.7% | 66.0% |
| 4940975 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.75 | 61.0 | 5.23e-01 | 84.1% | 59.0% |
| 5000831 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.75 | 66.0 | 5.83e-01 | 92.3% | 68.7% |
| 4956744 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.72 | 54.0 | 4.92e-01 | 77.4% | 67.5% |
| 5051424 | 304.4.1.3 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII | 0.60 | 31.0 | 4.26e-01 | 84.1% | 100.0% |
| 4993996 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.60 | 41.0 | 4.44e-01 | 86.2% | 83.1% |
| 4510984 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.59 | 39.0 | 4.33e-01 | 86.2% | 83.9% |
| 1291622 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.57 | 40.0 | 4.33e-01 | 87.7% | 85.0% |
| 4517135 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.57 | 43.0 | 4.48e-01 | 87.7% | 85.1% |
| 1088692 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.57 | 47.0 | 4.45e-01 | 86.2% | 89.6% |
| 4215509 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.57 | 39.0 | 4.25e-01 | 86.7% | 84.4% |
| None | — | 0.57 | 42.0 | 3.22e-01 | 75.9% | 74.3% | |
| 4350351 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.57 | 39.0 | 4.27e-01 | 86.2% | 85.0% |
| 4249312 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.57 | 40.0 | 4.30e-01 | 86.2% | 86.3% |
| 4554584 | 304.20.1.5 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f | 0.56 | 42.0 | 4.09e-01 | 76.4% | 100.0% |
| None | — | 0.56 | 42.0 | 3.11e-01 | 76.4% | 73.9% | |
| 3970204 | 304.41.1.0 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain | 0.56 | 38.0 | 4.24e-01 | 87.7% | 86.5% |
| 4280384 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.56 | 39.0 | 4.18e-01 | 87.7% | 81.8% |
| 4995762 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.56 | 46.0 | 4.42e-01 | 86.2% | 90.5% |
| 4051662 | 304.55.2.7 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f | 0.56 | 40.0 | 3.82e-01 | 72.8% | 98.7% |
| 4337484 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.56 | 37.0 | 4.11e-01 | 88.2% | 86.0% |
| 4428005 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.55 | 38.0 | 4.13e-01 | 86.2% | 83.7% |
| 4075391 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.55 | 38.0 | 4.14e-01 | 86.2% | 85.0% |
| 4082567 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.55 | 38.0 | 4.13e-01 | 87.7% | 86.5% |
| 3280378 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.55 | 36.0 | 3.85e-01 | 94.9% | 76.4% |
| 4307718 | 304.55.2.7 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f | 0.54 | 41.0 | 3.94e-01 | 77.9% | 100.0% |
| 3386169 | 304.55.2.7 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f | 0.54 | 40.0 | 3.86e-01 | 74.9% | 99.5% |
| 3268328 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.53 | 42.0 | 3.89e-01 | 98.5% | 64.9% |
| 4988485 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.53 | 42.0 | 4.32e-01 | 87.7% | 87.0% |
| None | — | 0.53 | 43.0 | 3.26e-01 | 99.0% | 35.3% | |
| 5071942 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.52 | 40.0 | 4.01e-01 | 78.5% | 89.0% |
| 3406543 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.52 | 43.0 | 3.19e-01 | 98.5% | 33.4% |
| 3957247 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.52 | 40.0 | 3.83e-01 | 98.5% | 68.7% |
| None | — | 0.52 | 43.0 | 3.15e-01 | 96.9% | 32.8% | |
| 4992428 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.50 | 40.0 | 3.98e-01 | 81.5% | 89.9% |
| 4054591 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.50 | 39.0 | 4.00e-01 | 80.5% | 90.0% |
| 3936578 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.50 | 40.0 | 3.80e-01 | 99.0% | 69.4% |
| None | — | 0.50 | 40.0 | 3.64e-01 | 98.5% | 62.7% |
D6
medium
residues 459-704
Domain cluster:
rep: OP947158.1__WBK39751.1__X__00033__D1-199
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13148.12 best | DUF3987 | 49.0 | 7.20e-13 | 60.6% | 35.2% |
D7
medium
residues 705-796
Domain cluster:
rep: MH179474.1__AWH14685.1__X__00053__D677-770