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IMGVR_UViG_3300009388_000046-3300009388-Ga0103809_100011522

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300009388_000046-3300009388-Ga0103809_100011522 ↗
Kingdom:: archaea

Quality

62.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-69

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4mbsA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.82	55.0	3.36e-01	70.2%	11.8%
4g6tB00	6.10.20.120	Special › Helix non-globular › Arc Repressor Mutant, subunit A ›	0.72	39.0	3.63e-01	77.2%	43.7%
1wp1B01	1.20.1600.10	Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP)	0.70	60.0	3.70e-01	100.0%	15.3%
3u1nB01	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.65	44.0	2.67e-01	91.2%	11.9%
5hn3A00	3.40.718.10	Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase	0.62	35.0	2.16e-01	71.9%	9.0%
6fndA01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.55	40.0	2.77e-01	77.2%	69.4%
3euoA02	3.40.47.10	Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase	0.55	36.0	2.69e-01	73.7%	24.8%
5ttjA01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.54	37.0	2.48e-01	71.9%	73.3%
2fbhA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	39.0	2.90e-01	73.7%	60.6%
8eg0B01	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.53	43.0	2.69e-01	91.2%	26.9%
2xguB00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.51	37.0	2.80e-01	77.2%	94.8%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3593736	192.7.1.0 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm	0.85	57.0	4.66e-01	70.2%	57.0%
3723257	5042.1.1.0 ↗	extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region	0.77	65.0	5.64e-01	91.2%	61.2%
3485296	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.73	61.0	4.92e-01	100.0%	49.5%
3991544	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.71	57.0	4.76e-01	96.5%	51.0%
4978597	4177.1.1.0 ↗	alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like	0.70	58.0	4.05e-01	96.5%	28.1%
4645961	102.2.1.3 ↗	alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N	0.70	57.0	3.99e-01	93.0%	41.1%
3921728	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.66	56.0	4.48e-01	96.5%	53.9%
3307706	2484.1.1.1 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70	0.64	46.0	3.52e-01	87.7%	32.1%
4051351	298.1.1.8 ↗	a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C	0.62	40.0	2.66e-01	94.7%	15.8%
4351646	216.1.1.0 ↗	a+b two layers › UBC-like › UBC-like › UBC-like	0.55	42.0	2.93e-01	82.5%	33.0%