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IMGVR_UViG_3300009433_000007-3300009433-Ga0115545_100005942
Arc-VirIMGVR_UViG_3300009433_000007-3300009433-Ga0115545_100005942
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-81_132-160
Domain cluster:
rep: CG_2015-01t_scaffold_23_prodigal-single.1__X__X__00182__D2-69_125-154
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5t05B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 62.0 | 4.49e-01 | 97.2% | 76.0% |
| 2g0tA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 55.0 | 4.54e-01 | 94.4% | 93.3% |
| 4b3xA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 54.0 | 4.65e-01 | 94.4% | 93.0% |
| 7z67A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 50.0 | 3.98e-01 | 87.0% | 87.6% |
| 5bovB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 55.0 | 3.99e-01 | 100.0% | 92.4% |
| 1zoiA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 55.0 | 4.08e-01 | 100.0% | 94.9% |
| 3ibtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 54.0 | 4.47e-01 | 100.0% | 93.8% |
| 3vzpC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 50.0 | 3.91e-01 | 92.6% | 93.0% |
| 2feaA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.59 | 51.0 | 4.83e-01 | 93.5% | 94.5% |
| 6xy9A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 52.0 | 3.86e-01 | 100.0% | 92.7% |
| 1nrjB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 52.0 | 4.34e-01 | 98.1% | 99.5% |
| 4g9bA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.59 | 49.0 | 4.46e-01 | 92.6% | 94.6% |
| 3wbkB03 | 3.40.50.10050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3 | 0.58 | 49.0 | 4.89e-01 | 100.0% | 87.0% |
| 5ee0A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 51.0 | 4.32e-01 | 94.4% | 93.6% |
| 8tbxA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 3.82e-01 | 90.7% | 70.7% |
| 3pp8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 45.0 | 3.86e-01 | 87.0% | 94.0% |
| 3fkqA01 | 3.40.50.10850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ntrc-like two-domain protein. | 0.57 | 48.0 | 4.75e-01 | 93.5% | 88.8% |
| 3tqfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 51.0 | 4.44e-01 | 100.0% | 84.2% |
| 3l84A03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 50.0 | 4.87e-01 | 99.1% | 96.6% |
| 2o1sB03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 51.0 | 4.83e-01 | 100.0% | 92.9% |
| 1um8A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 38.0 | 3.02e-01 | 71.3% | 86.5% |
| 2qbyA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 43.0 | 3.76e-01 | 87.0% | 91.9% |
| 4ew6A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 46.0 | 4.47e-01 | 95.4% | 95.8% |
| 1gpeA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 46.0 | 3.79e-01 | 100.0% | 90.7% |
| 4cujA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 41.0 | 3.38e-01 | 84.3% | 79.6% |
| 4finB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 43.0 | 3.39e-01 | 96.3% | 83.1% |
| 5eccA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.51 | 43.0 | 3.85e-01 | 93.5% | 99.4% |
| 4ha7B00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.50 | 43.0 | 3.60e-01 | 98.1% | 94.1% |
| 2k2qB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 41.0 | 3.24e-01 | 90.7% | 95.9% |
| 1vsrA00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.50 | 39.0 | 3.66e-01 | 84.3% | 87.3% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943343 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.72 | 61.0 | 5.16e-01 | 91.7% | 100.0% |
| 3992943 | 2004.1.1.51 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_1 | 0.71 | 61.0 | 4.50e-01 | 93.5% | 61.8% |
| 4656868 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.65 | 56.0 | 4.70e-01 | 94.4% | 91.4% |
| 4125989 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.64 | 54.0 | 4.73e-01 | 92.6% | 96.2% |
| 4530056 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.63 | 55.0 | 4.68e-01 | 97.2% | 96.1% |
| 5029493 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.62 | 52.0 | 4.41e-01 | 92.6% | 100.0% |
| 4000974 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.62 | 53.0 | 4.68e-01 | 94.4% | 96.9% |
| 2068260 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.58 | 47.0 | 3.75e-01 | 88.0% | 76.5% |
| 2627977 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.57 | 46.0 | 3.88e-01 | 87.0% | 93.6% |
| 4985450 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.57 | 47.0 | 4.15e-01 | 89.8% | 83.2% |
| 3988514 | 2003.1.1.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_3 | 0.55 | 46.0 | 4.47e-01 | 92.6% | 95.0% |
| 4931537 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.55 | 43.0 | 4.02e-01 | 85.2% | 77.1% |
| 4887679 | 7579.1.1.196 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, PAS_9 | 0.55 | 43.0 | 3.32e-01 | 86.1% | 46.0% |
| 4835249 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.54 | 43.0 | 3.85e-01 | 86.1% | 69.2% |
| 3502256 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.53 | 44.0 | 3.96e-01 | 93.5% | 98.1% |
| 4821733 | 2004.1.1.233 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 | 0.52 | 39.0 | 3.99e-01 | 78.7% | 94.2% |
| None | — | 0.52 | 41.0 | 3.47e-01 | 86.1% | 85.3% | |
| 4941722 | 2003.1.8.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › PglD_N | 0.52 | 42.0 | 4.46e-01 | 91.7% | 100.0% |
| 5073766 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.51 | 41.0 | 3.82e-01 | 88.9% | 94.3% |
| 4530254 | 2004.1.1.348 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SbcC_Walker_B | 0.51 | 44.0 | 2.87e-01 | 98.1% | 97.2% |
| 4107066 | 2004.1.1.348 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SbcC_Walker_B | 0.51 | 43.0 | 2.87e-01 | 99.1% | 97.2% |
| 4951720 | 7513.1.1.1 ↗ | a/b three-layered sandwiches › CofD-like › CofD-like › CofD-like › CofD | 0.50 | 44.0 | 3.26e-01 | 98.1% | 99.7% |
D2
high
residues 83-127_177-204
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zvwA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.54 | 40.0 | 4.20e-01 | 80.8% | 90.9% |
| 2qdjA03 | 1.10.472.140 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.53 | 36.0 | 3.21e-01 | 72.6% | 97.4% |
| 5dajD00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 40.0 | 3.06e-01 | 86.3% | 71.9% |
| 8gjaD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 43.0 | 3.03e-01 | 100.0% | 79.6% |