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IMGVR_UViG_3300009433_000007-3300009433-Ga0115545_100005946

Arc-Vir

IMGVR_UViG_3300009433_000007-3300009433-Ga0115545_100005946

Quality

86.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-54
PDB
Domain cluster: representative
CATH (79)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.44e-01 100.0% 75.0%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.57e-01 100.0% 85.3%
7vw6B01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.73 62.0 5.66e-01 96.0% 74.6%
2o2kA01 3.10.196.10 Alpha Beta › Roll › Cobalamin-dependent Methionine Synthase; domain 1 › Vitamin B12-dependent methionine synthase, activation domain 0.72 54.0 3.46e-01 82.0% 70.4%
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.33e-01 100.0% 63.0%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 49.0 5.00e-01 86.0% 75.0%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.30e-01 100.0% 75.6%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.19e-01 100.0% 75.6%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 5.18e-01 100.0% 61.4%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 54.0 5.55e-01 84.0% 91.5%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.69 52.0 4.87e-01 82.0% 65.1%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 52.0 4.70e-01 82.0% 59.2%
2pmyA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.69 54.0 4.84e-01 90.0% 69.9%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 5.19e-01 100.0% 78.9%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 52.0 5.37e-01 84.0% 89.4%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.21e-01 100.0% 40.6%
1mgtA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.02e-01 100.0% 84.0%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 4.96e-01 100.0% 78.7%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.10e-01 100.0% 83.6%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.67 49.0 5.14e-01 96.0% 100.0%
7eebI01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.67 55.0 3.89e-01 96.0% 31.4%
3i9v201 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.67 57.0 5.17e-01 100.0% 70.8%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.11e-01 100.0% 79.7%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.16e-01 100.0% 38.0%
6yetA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.66 56.0 4.66e-01 98.0% 60.4%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.24e-01 100.0% 88.9%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 5.05e-01 100.0% 77.6%
2scpA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.66 56.0 3.88e-01 98.0% 31.6%
1snlA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.65 52.0 4.26e-01 92.0% 68.7%
1ij5A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.65 53.0 4.02e-01 96.0% 38.9%
2mw8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 50.0 4.60e-01 86.0% 71.6%
5zr6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 5.19e-01 100.0% 91.5%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 54.0 4.34e-01 100.0% 47.1%
2bl0C01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 55.0 4.88e-01 100.0% 72.0%
3mseB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 52.0 3.76e-01 100.0% 86.3%
6yigA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 53.0 4.46e-01 96.0% 59.1%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 5.04e-01 100.0% 84.6%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 46.0 4.02e-01 82.0% 52.0%
1x2mA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 47.0 4.69e-01 84.0% 79.6%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 52.0 4.87e-01 100.0% 81.8%
3qrxA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.63 47.0 4.38e-01 86.0% 73.5%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 4.45e-01 100.0% 69.0%
1kczA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.63 42.0 2.95e-01 70.0% 32.5%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 4.52e-01 100.0% 67.1%
4mspB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 53.0 4.72e-01 98.0% 84.0%
2f33A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 53.0 4.50e-01 100.0% 73.6%
2r2iA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 52.0 4.48e-01 100.0% 73.6%
4b0zA00 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 50.0 3.35e-01 98.0% 21.6%
2ld5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 48.0 4.41e-01 86.0% 70.1%
5h0pA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.61 53.0 4.23e-01 98.0% 55.9%
5unlB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 50.0 3.17e-01 92.0% 40.5%
2de2A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.61 50.0 3.45e-01 98.0% 70.6%
1s1eA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.61 48.0 3.35e-01 90.0% 28.7%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 4.96e-01 100.0% 87.9%
2mhhA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.61 49.0 4.18e-01 100.0% 64.6%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.02e-01 100.0% 54.1%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 50.0 4.62e-01 100.0% 72.9%
3k21A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 50.0 4.63e-01 98.0% 80.9%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.60 48.0 3.47e-01 92.0% 78.7%
3tduA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 45.0 3.92e-01 90.0% 60.0%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 4.43e-01 100.0% 77.6%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 52.0 4.35e-01 98.0% 84.7%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.24e-01 100.0% 68.2%
4gftA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 50.0 4.68e-01 100.0% 82.5%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 43.0 3.78e-01 84.0% 61.0%
6pw7A01 1.10.238.180 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.58 49.0 4.38e-01 100.0% 69.3%
2aaoB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 47.0 3.59e-01 100.0% 38.8%
1di1A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.57 44.0 2.84e-01 92.0% 34.5%
4i5lB01 1.10.238.230 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.57 45.0 3.77e-01 96.0% 50.0%
3rd8A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.57 42.0 4.18e-01 84.0% 90.7%
4ociA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 47.0 4.35e-01 96.0% 77.3%
2lbfB01 1.10.10.1410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.56 44.0 4.17e-01 98.0% 73.9%
3fwbA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 46.0 4.07e-01 100.0% 79.3%
2bnxB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 44.0 2.98e-01 96.0% 30.4%
1furB03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.56 40.0 4.02e-01 82.0% 88.2%
3pm8B01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 47.0 4.03e-01 100.0% 78.6%
1omvA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 42.0 3.68e-01 98.0% 72.1%
2bl0B01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 42.0 3.95e-01 100.0% 79.4%
1cukA03 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.51 34.0 3.47e-01 70.0% 75.0%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5051627 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 74.0 6.61e-01 98.0% 77.1%
5064533 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 75.0 6.64e-01 100.0% 75.7%
5059917 101.1.2.279 alpha arrays › HTH › HTH › winged helix domain › AbiEi_4 0.82 70.0 6.47e-01 98.0% 83.1%
5005585 101.1.2.750 alpha arrays › HTH › HTH › winged helix domain › PF27374 0.78 67.0 5.26e-01 100.0% 89.1%
4942782 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.76 64.0 5.61e-01 100.0% 75.9%
5042147 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.75 63.0 5.54e-01 100.0% 75.0%
5054311 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.75 62.0 5.30e-01 100.0% 67.4%
5042180 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 62.0 5.47e-01 100.0% 75.9%
5037171 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.74 62.0 5.44e-01 100.0% 77.2%
4936458 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 5.52e-01 100.0% 80.0%
4585396 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.73 57.0 4.04e-01 86.0% 29.4%
4991298 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 5.32e-01 100.0% 75.0%
5064786 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.73 61.0 5.70e-01 100.0% 92.3%
3479237 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.72 61.0 5.58e-01 100.0% 81.4%
3476119 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.72 62.0 5.28e-01 100.0% 64.7%
5000771 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 5.64e-01 100.0% 92.3%
3482581 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.72 62.0 5.36e-01 100.0% 63.7%
3493536 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.72 60.0 4.75e-01 100.0% 60.9%
3477233 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.71 61.0 5.18e-01 100.0% 63.5%
5081852 101.1.2.837 alpha arrays › HTH › HTH › winged helix domain › Lin1244_N 0.71 60.0 5.09e-01 100.0% 63.3%
5064854 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 5.02e-01 100.0% 65.6%
4960039 3745.1.1.1 alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex 0.71 51.0 3.10e-01 76.0% 80.3%
3881792 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.70 55.0 4.81e-01 90.0% 62.5%
4936029 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 58.0 3.85e-01 100.0% 22.8%
3874689 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.69 57.0 4.61e-01 100.0% 46.4%
3500100 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.69 57.0 5.28e-01 94.0% 73.8%
3471412 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.69 58.0 5.00e-01 100.0% 61.2%
3826016 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.68 54.0 3.63e-01 90.0% 25.4%
3429686 108.1.1.1 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 0.68 54.0 3.78e-01 90.0% 30.6%
3470303 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.68 53.0 4.70e-01 92.0% 63.7%
3492477 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.68 58.0 4.92e-01 98.0% 60.0%
3409961 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.68 53.0 4.82e-01 90.0% 72.9%
3893980 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 52.0 4.95e-01 86.0% 80.0%
3931416 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.67 52.0 4.23e-01 90.0% 52.4%
3568063 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.67 51.0 5.02e-01 84.0% 85.5%
3491972 108.1.1.28 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.67 53.0 4.70e-01 90.0% 68.0%
3335466 108.1.1.28 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.67 49.0 4.20e-01 84.0% 54.4%
2722821 108.1.1.25 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_4 0.66 56.0 4.49e-01 98.0% 56.7%
4476781 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.66 50.0 4.58e-01 86.0% 68.6%
4673146 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.66 51.0 4.54e-01 90.0% 63.7%
4224260 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 4.49e-01 100.0% 50.5%
3886518 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.66 56.0 4.99e-01 98.0% 74.7%
3480164 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.66 56.0 4.94e-01 98.0% 73.3%
3437370 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.66 52.0 4.08e-01 90.0% 44.3%
3477866 108.1.1.99 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.66 55.0 4.98e-01 96.0% 74.3%
3459251 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.66 52.0 4.52e-01 90.0% 63.7%
3919874 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.65 56.0 4.84e-01 98.0% 68.8%
4997341 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 4.98e-01 100.0% 83.1%
3486224 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.65 54.0 4.84e-01 98.0% 74.7%
3754560 108.1.1.99 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.64 55.0 4.76e-01 98.0% 68.8%
3258496 108.1.1.26 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.64 53.0 4.76e-01 98.0% 74.7%
3594470 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.64 52.0 4.44e-01 96.0% 62.2%
None 0.64 54.0 4.37e-01 98.0% 55.0%
2713179 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.64 52.0 4.78e-01 98.0% 83.3%
3304545 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.64 51.0 4.31e-01 90.0% 57.6%
3559383 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.63 53.0 4.33e-01 98.0% 54.0%
3651470 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 53.0 4.00e-01 98.0% 43.1%
3834432 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.63 52.0 4.24e-01 100.0% 79.0%
3465762 108.1.1.109 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7, EF-hand_8 0.63 53.0 3.72e-01 100.0% 78.9%
3096050 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 52.0 4.20e-01 100.0% 48.6%
3911180 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.63 52.0 3.71e-01 98.0% 31.8%
3864249 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.63 51.0 4.27e-01 98.0% 56.8%
3906628 108.1.1.107 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7, EF-hand_8 0.62 51.0 4.57e-01 98.0% 70.7%
3470275 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.62 53.0 4.70e-01 100.0% 73.3%
3481260 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 51.0 4.01e-01 100.0% 57.6%
3901277 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 49.0 4.17e-01 98.0% 56.8%
3594149 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 53.0 4.67e-01 100.0% 73.3%
133757 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.61 49.0 4.23e-01 98.0% 61.4%
3941245 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.60 52.0 4.80e-01 100.0% 84.6%
3922770 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.60 46.0 3.79e-01 90.0% 50.5%
4448192 108.1.1.26 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.60 46.0 4.23e-01 90.0% 72.9%
3922485 108.1.1.1 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 0.60 46.0 3.74e-01 90.0% 48.6%
3288023 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.60 49.0 3.53e-01 100.0% 84.7%
1198650 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.60 43.0 3.70e-01 84.0% 53.2%
3709962 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 48.0 4.08e-01 100.0% 67.4%
3504090 108.1.1.39 alpha arrays › EF-hand › EF-hand-related › EF-hand › P2R3B_EF-hand 0.59 49.0 4.19e-01 96.0% 63.5%
3889256 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.59 45.0 3.87e-01 90.0% 56.7%
4124145 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 49.0 4.06e-01 100.0% 58.0%
3605348 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 50.0 4.57e-01 100.0% 77.1%
3214700 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 46.0 4.25e-01 96.0% 72.9%
3570305 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.58 48.0 4.21e-01 98.0% 67.5%
3890516 108.1.1.1 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 0.58 48.0 4.38e-01 98.0% 77.1%
3777424 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.58 47.0 3.48e-01 98.0% 36.7%
3407527 108.1.1.39 alpha arrays › EF-hand › EF-hand-related › EF-hand › P2R3B_EF-hand 0.57 45.0 3.98e-01 96.0% 58.8%
4216197 108.1.1.30 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 0.57 46.0 3.74e-01 96.0% 51.4%
3578254 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 45.0 4.00e-01 96.0% 67.5%
3845741 108.1.1.113 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6 0.57 47.0 4.12e-01 98.0% 67.5%
4016368 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 47.0 3.91e-01 98.0% 56.8%
2671023 108.1.1.27 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.56 44.0 4.12e-01 100.0% 70.1%
3754375 108.1.1.39 alpha arrays › EF-hand › EF-hand-related › EF-hand › P2R3B_EF-hand 0.55 46.0 3.64e-01 100.0% 46.1%
3577932 108.1.1.39 alpha arrays › EF-hand › EF-hand-related › EF-hand › P2R3B_EF-hand 0.55 46.0 3.98e-01 100.0% 60.0%
3622358 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 45.0 3.84e-01 100.0% 53.7%
4928641 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.55 44.0 4.05e-01 100.0% 70.7%
3196628 108.1.1.27 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.55 46.0 4.11e-01 100.0% 68.0%
3713438 108.1.1.27 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.54 41.0 3.79e-01 88.0% 68.6%
D2 high residues 91-250
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07728.21 best AAA_5 64.1 2.00e-17 87.5% 99.3%
D3 high residues 256-340
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08406.17 best CbbQ_C 22.9 1.10e-04 96.5% 81.2%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vkgA18 1.10.8.720 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Region D6 of dynein motor 0.79 72.0 5.64e-01 100.0% 67.1%
2fnaA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.75 53.0 5.59e-01 83.5% 81.6%
1gakA00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.64 43.0 3.73e-01 70.6% 70.8%
2q14B01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.63 54.0 4.01e-01 97.6% 63.5%
6qumA04 1.10.1140.10 Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 0.60 48.0 4.03e-01 88.2% 80.5%
3on3B00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.58 48.0 3.90e-01 92.9% 82.3%
2zopA00 1.10.520.30 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain 0.58 42.0 3.86e-01 82.4% 58.0%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 45.0 4.45e-01 84.7% 95.5%
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 43.0 4.36e-01 82.4% 95.3%
4bx9C00 1.10.150.780 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Vps16, C-terminal region 0.54 41.0 4.05e-01 100.0% 75.8%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.53 47.0 3.92e-01 100.0% 73.4%
7xxiA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 47.0 3.30e-01 100.0% 49.7%
1x9fD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 42.0 3.58e-01 85.9% 70.0%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.53 42.0 3.48e-01 90.6% 88.2%
2wmoA01 1.25.40.410 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DOCK DHR2 domain, lobe A 0.52 45.0 3.84e-01 94.1% 81.3%
1aisB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 44.0 4.21e-01 97.6% 92.9%
2qcvA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 38.0 2.73e-01 82.4% 53.5%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4565984 148.1.3.4 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › CbbQ_C 0.92 87.0 8.15e-01 100.0% 92.0%
4948085 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.90 85.0 7.98e-01 100.0% 95.0%
3607806 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.90 84.0 7.76e-01 100.0% 86.7%
3944791 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.88 82.0 8.06e-01 100.0% 95.6%
3871672 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.88 82.0 7.43e-01 100.0% 82.7%
4928225 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.86 79.0 7.48e-01 100.0% 93.0%
4425454 148.1.3.4 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › CbbQ_C 0.86 80.0 7.37e-01 100.0% 83.8%
5002943 148.1.3.4 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › CbbQ_C 0.85 79.0 7.76e-01 100.0% 97.8%
4147448 148.1.3.4 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › CbbQ_C 0.84 77.0 7.58e-01 100.0% 97.8%
5063952 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.81 72.0 4.97e-01 96.5% 31.2%
3586873 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 70.0 6.69e-01 100.0% 92.0%
3608388 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.68 54.0 4.55e-01 87.1% 62.8%
3505931 6130.1.1.0 alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain 0.67 47.0 5.09e-01 75.3% 87.1%
4929245 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.65 49.0 5.32e-01 81.2% 100.0%
3824733 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.59 42.0 4.30e-01 75.3% 91.8%
3690135 616.1.1.0 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.57 46.0 4.13e-01 87.1% 80.8%
3922012 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 41.0 4.05e-01 82.4% 70.5%
3949344 604.39.1.0 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.56 45.0 3.62e-01 87.1% 58.2%
3654442 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.55 36.0 3.70e-01 81.2% 70.0%
5016324 601.3.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.53 44.0 4.32e-01 96.5% 84.2%