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IMGVR_UViG_3300009496_002301-3300009496-Ga0115570_100106261
Arc-VirIMGVR_UViG_3300009496_002301-3300009496-Ga0115570_100106261
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-59_77-89
Domain cluster:
rep: LC121084.1__BAU40030.1__X__00072__D253-335
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37A03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.65 | 49.0 | 5.21e-01 | 100.0% | 96.7% |
| 2kmwA01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 37.0 | 3.27e-01 | 93.1% | 48.1% |
| 6ovpA00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.54 | 46.0 | 3.81e-01 | 90.3% | 69.5% |
| 1bqbA01 | 3.10.170.10 | Alpha Beta › Roll › Elastase; domain 1 › | 0.54 | 43.0 | 3.39e-01 | 88.9% | 76.0% |
| 1c44A00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.53 | 45.0 | 3.73e-01 | 91.7% | 75.6% |
| 3ssoA01 | 3.30.1050.30 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › | 0.52 | 36.0 | 2.89e-01 | 73.6% | 64.3% |
| 5tkwA01 | 3.30.420.380 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.50 | 41.0 | 3.12e-01 | 90.3% | 89.4% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002752 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.71 | 61.0 | 6.04e-01 | 94.4% | 100.0% |
| 3973343 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.68 | 54.0 | 5.63e-01 | 98.6% | 95.4% |
| 5002661 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.67 | 55.0 | 5.75e-01 | 98.6% | 100.0% |
| 3980575 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.65 | 55.0 | 5.62e-01 | 100.0% | 97.1% |
| 3594463 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.57 | 44.0 | 3.08e-01 | 80.6% | 38.5% |
| 4946991 | 239.1.1.2 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_S6e | 0.57 | 40.0 | 3.26e-01 | 72.2% | 92.5% |
| 4669955 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.57 | 39.0 | 3.20e-01 | 72.2% | 99.2% |
| 4023494 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 42.0 | 3.53e-01 | 79.2% | 94.2% |
| 3946272 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 38.0 | 2.87e-01 | 70.8% | 61.8% |
| 3745675 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.55 | 38.0 | 3.30e-01 | 72.2% | 89.1% |
| 3995034 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 37.0 | 3.62e-01 | 70.8% | 96.2% |
| 3226771 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 38.0 | 3.64e-01 | 72.2% | 97.5% |
| 3704397 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 37.0 | 3.53e-01 | 72.2% | 96.5% |
| 3270557 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.53 | 43.0 | 3.65e-01 | 88.9% | 60.0% |
| 4864058 | 4987.1.1.1 ↗ | few secondary structure elements › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal_L31 | 0.53 | 31.0 | 3.38e-01 | 72.2% | 68.9% |
| 3612584 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 37.0 | 3.15e-01 | 72.2% | 81.8% |
| 3249989 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.53 | 37.0 | 2.86e-01 | 72.2% | 56.6% |
| 3243039 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.53 | 44.0 | 3.64e-01 | 91.7% | 67.7% |
| 3702630 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 37.0 | 3.39e-01 | 72.2% | 85.6% |
| 3347366 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.52 | 36.0 | 3.14e-01 | 72.2% | 52.2% |
| 3708857 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 39.0 | 3.42e-01 | 79.2% | 98.1% |
| 3368300 | 221.1.1.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2 | 0.52 | 36.0 | 2.99e-01 | 72.2% | 77.5% |
| 160942 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.52 | 36.0 | 3.00e-01 | 72.2% | 64.4% |
| 3869834 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 36.0 | 2.94e-01 | 72.2% | 60.8% |
| 4358456 | 4987.1.1.1 ↗ | few secondary structure elements › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal_L31 | 0.52 | 31.0 | 3.51e-01 | 73.6% | 78.2% |
| 3618613 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.52 | 46.0 | 3.49e-01 | 100.0% | 70.3% |
| 3506970 | 221.1.1.36 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N | 0.52 | 27.0 | 2.56e-01 | 91.7% | 40.0% |
| 3862546 | 221.1.1.77 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UCH_UBL1 | 0.52 | 36.0 | 3.25e-01 | 72.2% | 81.1% |
| 3572230 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 38.0 | 3.62e-01 | 77.8% | 95.3% |
| 3479436 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 35.0 | 3.11e-01 | 70.8% | 92.0% |
| 4477848 | 3068.2.1.1 ↗ | a+b complex topology › Flagellar protein FlgA N-terminal domain-like › RNase J C-terminal domain › RNase J C-terminal domain › RNase_J_C | 0.51 | 37.0 | 3.29e-01 | 79.2% | 96.4% |
| 2807753 | 2008.1.1.25 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YaeQ | 0.51 | 35.0 | 2.67e-01 | 72.2% | 83.0% |
| 166841 | 2008.1.1.25 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YaeQ | 0.51 | 35.0 | 2.66e-01 | 72.2% | 84.2% |
| 3717226 | 226.1.1.6 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › SANBR_BTB | 0.51 | 41.0 | 3.03e-01 | 86.1% | 56.0% |
| 4935436 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.51 | 41.0 | 3.50e-01 | 87.5% | 78.3% |
| 3618723 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.51 | 34.0 | 3.34e-01 | 70.8% | 98.8% |
| 3893791 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 34.0 | 3.03e-01 | 70.8% | 100.0% |
| 3254286 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.51 | 35.0 | 3.28e-01 | 72.2% | 84.1% |
| 3481778 | 221.1.1.56 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_f0 | 0.50 | 35.0 | 3.29e-01 | 72.2% | 98.8% |
D2
high
residues 92-157
Domain cluster:
rep: IMGVR_UViG_3300023281_001207-3300023281-Ga0255980_1064071__D2-60