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IMGVR_UViG_3300009496_002494-3300009496-Ga0115570_100125673
Arc-VirIMGVR_UViG_3300009496_002494-3300009496-Ga0115570_100125673
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-233
Domain cluster:
rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_1000384819__D2-187
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13640.13 best | 2OG-FeII_Oxy_3 | 62.7 | 7.60e-17 | 51.8% | 96.9% |
| PF13661.13 | 2OG-FeII_Oxy_4 | 46.6 | 5.70e-12 | 48.2% | 74.5% |
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nhxA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.90 | 72.0 | 7.26e-01 | 88.5% | 82.4% |
| 4j25F00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.85 | 64.0 | 7.03e-01 | 85.0% | 92.5% |
| 3kt7A01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.83 | 72.0 | 6.97e-01 | 89.4% | 87.4% |
| 3kt4A02 | 3.60.130.20 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain | 0.81 | 67.0 | 5.89e-01 | 85.8% | 77.8% |
| 4mv2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.80 | 38.0 | 5.26e-01 | 77.0% | 86.7% |
| 4nhxA02 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.80 | 65.0 | 6.43e-01 | 85.0% | 80.4% |
| 2g19A00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.78 | 66.0 | 6.83e-01 | 89.8% | 91.2% |
| 5j7mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.78 | 38.0 | 5.26e-01 | 79.2% | 88.5% |
| 3eqeA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.77 | 47.0 | 5.63e-01 | 92.9% | 87.2% |
| 4qmaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.76 | 46.0 | 5.77e-01 | 93.8% | 95.1% |
| 7vbqA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.73 | 60.0 | 5.74e-01 | 89.4% | 74.3% |
| 7fcbC01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.73 | 59.0 | 5.57e-01 | 89.4% | 70.9% |
| 3nnfA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.72 | 62.0 | 5.50e-01 | 90.3% | 77.4% |
| 4naoA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.72 | 61.0 | 5.65e-01 | 89.4% | 70.9% |
| 4y5tB00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.71 | 61.0 | 5.59e-01 | 89.4% | 71.6% |
| 5zm4B00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.71 | 61.0 | 5.62e-01 | 89.8% | 73.2% |
| 3pl0B00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.69 | 60.0 | 5.77e-01 | 89.8% | 90.5% |
| 5lz6A00 | 2.60.120.680 | Mainly Beta › Sandwich › Jelly Rolls › GOLD domain | 0.68 | 37.0 | 4.88e-01 | 84.5% | 95.2% |
| 7eehA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.67 | 57.0 | 5.57e-01 | 89.4% | 91.2% |
| 2rdqA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.67 | 57.0 | 5.41e-01 | 89.4% | 86.0% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 35.0 | 4.58e-01 | 88.1% | 92.7% |
| 4ccjA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.65 | 54.0 | 5.24e-01 | 86.3% | 81.7% |
| 6fzvD01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.63 | 34.0 | 4.57e-01 | 73.5% | 100.0% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 43.0 | 5.14e-01 | 88.9% | 99.4% |
| 1jr7A00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.60 | 50.0 | 4.46e-01 | 85.4% | 91.2% |
| 8hhvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 33.0 | 4.34e-01 | 74.8% | 100.0% |
| 4ylmX00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.59 | 51.0 | 4.71e-01 | 89.4% | 79.2% |
| 7chiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 46.0 | 4.74e-01 | 99.6% | 85.2% |
| 3kmhA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 46.0 | 4.73e-01 | 92.0% | 85.3% |
| 2w47A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 32.0 | 4.03e-01 | 73.0% | 90.4% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 35.0 | 4.14e-01 | 73.9% | 90.5% |
| 4qawH03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 32.0 | 3.96e-01 | 73.0% | 90.3% |
| 2qfeA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 35.0 | 4.31e-01 | 73.9% | 99.3% |
| 2e26A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 35.0 | 4.18e-01 | 74.8% | 92.9% |
| 4xuoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 35.0 | 4.05e-01 | 78.3% | 92.3% |
| 2v72A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 31.0 | 3.86e-01 | 72.1% | 92.0% |
| 1w9sA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 31.0 | 3.91e-01 | 83.6% | 94.8% |
| 1gwmA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.53 | 30.0 | 3.60e-01 | 77.0% | 80.4% |
| 6tfjA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 29.0 | 3.76e-01 | 71.7% | 100.0% |
| 2j1vA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 31.0 | 3.74e-01 | 72.6% | 90.8% |
| 1gqpA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 40.0 | 4.39e-01 | 85.4% | 100.0% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 31.0 | 3.80e-01 | 76.5% | 92.3% |
| 2yfuA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 31.0 | 3.79e-01 | 73.9% | 92.9% |
| 2j1aA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 30.0 | 3.70e-01 | 75.7% | 90.1% |
| 4jx0A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 33.0 | 3.97e-01 | 84.5% | 99.3% |
| 3km5A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 37.0 | 4.10e-01 | 75.2% | 93.3% |
| 4pqqA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 33.0 | 3.86e-01 | 75.7% | 94.2% |
| 1k3iA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 34.0 | 4.00e-01 | 86.7% | 99.4% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1411393 | 10.12.1.54 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_4 | 0.89 | 72.0 | 7.22e-01 | 88.9% | 81.9% |
| 5062641 | 10.12.1.54 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_4 | 0.88 | 66.0 | 7.35e-01 | 84.1% | 95.0% |
| 3226511 | 10.12.1.54 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_4 | 0.88 | 73.0 | 7.26e-01 | 98.7% | 82.8% |
| 3391336 | 10.12.1.54 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_4 | 0.87 | 73.0 | 7.20e-01 | 90.7% | 82.1% |
| 3933117 | 10.12.1.54 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_4 | 0.86 | 72.0 | 7.39e-01 | 98.7% | 89.3% |
| 4087536 | 10.12.1.54 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_4 | 0.84 | 73.0 | 7.35e-01 | 88.5% | 89.8% |
| 3289882 | 10.12.1.54 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_4 | 0.82 | 71.0 | 6.80e-01 | 89.8% | 89.8% |
| 4406146 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.81 | 68.0 | 7.17e-01 | 86.3% | 95.6% |
| 2393233 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.80 | 66.0 | 6.74e-01 | 89.4% | 86.8% |
| 1411392 | 10.12.1.44 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD | 0.80 | 67.0 | 5.91e-01 | 85.8% | 79.3% |
| 3166919 | 10.12.1.131 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD, 2OG-FeII_Oxy_4 | 0.80 | 77.0 | 5.47e-01 | 100.0% | 85.1% |
| 3771849 | 10.12.1.131 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD, 2OG-FeII_Oxy_4 | 0.79 | 76.0 | 5.74e-01 | 100.0% | 85.8% |
| 3694503 | 10.12.1.44 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD | 0.79 | 66.0 | 5.98e-01 | 87.2% | 70.5% |
| 3626991 | 10.12.1.44 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD | 0.78 | 66.0 | 6.27e-01 | 87.2% | 83.1% |
| 3741587 | 10.12.1.44 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD | 0.78 | 65.0 | 6.12e-01 | 86.3% | 77.7% |
| 3253806 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.76 | 60.0 | 6.24e-01 | 85.4% | 86.2% |
| 3923391 | 10.12.1.44 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD | 0.75 | 64.0 | 6.25e-01 | 87.6% | 83.7% |
| 3265332 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.74 | 63.0 | 6.01e-01 | 87.2% | 92.2% |
| 3653469 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.73 | 61.0 | 5.73e-01 | 85.8% | 82.3% |
| 2794595 | 10.12.1.25 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH | 0.70 | 60.0 | 5.48e-01 | 89.4% | 69.4% |
| 3591997 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 38.0 | 4.96e-01 | 84.5% | 99.2% |
| 3192262 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.65 | 61.0 | 4.87e-01 | 98.7% | 72.6% |
| 3849772 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.65 | 35.0 | 4.72e-01 | 71.7% | 98.3% |
| 3510331 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.64 | 35.0 | 4.64e-01 | 73.0% | 96.0% |
| 3762740 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.64 | 35.0 | 4.68e-01 | 70.4% | 100.0% |
| 3282563 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.63 | 49.0 | 5.08e-01 | 98.7% | 85.7% |
| 3927107 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.63 | 36.0 | 4.67e-01 | 73.9% | 100.0% |
| 3256150 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.63 | 33.0 | 4.53e-01 | 70.4% | 99.1% |
| 3931580 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.63 | 35.0 | 4.58e-01 | 72.1% | 100.0% |
| 3228772 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.62 | 35.0 | 4.57e-01 | 74.3% | 100.0% |
| 3619736 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.62 | 36.0 | 4.64e-01 | 75.2% | 100.0% |
| 3931613 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.62 | 33.0 | 4.45e-01 | 72.1% | 100.0% |
| 3217657 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.61 | 35.0 | 4.53e-01 | 71.7% | 99.2% |
| None | — | 0.61 | 58.0 | 5.26e-01 | 100.0% | 90.1% | |
| 3910786 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.61 | 34.0 | 4.41e-01 | 71.2% | 94.6% |
| 3234999 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.61 | 32.0 | 4.40e-01 | 71.2% | 100.0% |
| 3619734 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.61 | 36.0 | 4.57e-01 | 73.5% | 100.0% |
| 3244081 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.61 | 34.0 | 4.43e-01 | 72.1% | 100.0% |
| 4615128 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 34.0 | 4.09e-01 | 70.8% | 83.3% |
| 3533876 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 32.0 | 4.26e-01 | 70.8% | 100.0% |
| 5039010 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 35.0 | 4.43e-01 | 81.4% | 100.0% |
| 5027268 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 36.0 | 4.22e-01 | 73.9% | 88.4% |
| 3543120 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.57 | 36.0 | 4.23e-01 | 73.5% | 89.4% |
| 5027316 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 35.0 | 4.13e-01 | 73.9% | 89.0% |
| 3708922 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 33.0 | 4.18e-01 | 70.4% | 100.0% |
| 3714436 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 33.0 | 4.11e-01 | 74.3% | 100.0% |
| 3916271 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.54 | 35.0 | 3.81e-01 | 72.1% | 77.3% |
| 3989895 | 10.32.1.86 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C_2 | 0.54 | 32.0 | 3.85e-01 | 74.3% | 88.0% |
| 3476199 | 10.32.1.28 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC | 0.53 | 32.0 | 3.75e-01 | 75.2% | 85.2% |
| 3585568 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.52 | 37.0 | 4.20e-01 | 76.1% | 95.9% |
| 3595693 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 37.0 | 4.00e-01 | 73.5% | 96.4% |
| 3601278 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 33.0 | 3.96e-01 | 72.1% | 100.0% |
| 3218282 | 2006.1.6.52 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF7154 | 0.50 | 37.0 | 3.35e-01 | 86.7% | 54.4% |